Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20equina_20[genbank_20GCA_5F001264685.1_202015-08-11] 117 sequences; 7,658,883 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq74 197 2e-45 seq75 114 2e-20 >seq74 Length=174556 Score = 197 bits (218), Expect = 2e-45 Identities = 689/1065 (65%), Gaps = 39/1065 (4%) Strand=Plus/Minus Query 111044 ATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGAC 111103 ||||| ||||||| ||||| || ||||| | ||| || || | ||| ||||| || || Sbjct 136881 ATAAACGCATCCGCCAGACCCTGGACACCGATACCGATGGGGCGGTGGCGCATGTTCGAG 136822 Query 111104 TTTCGCGCAGTCTCAACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTA 111163 |||||| |||| ||||| || | || |||| |||| ||||| | || ||| | Sbjct 136821 CGGCGCGCACTCTCCACGGGGTAGTAGTTGATGTCGATGATGCGGTTCAAGTTCTTGCAA 136762 Query 111164 ACAATCTTTGTGATTTCATG----------AAGTTTTTCATAATCAAAAGTGCGAGTCTC 111213 || | ||| | | || || ||||| | | | || || | || ||| | Sbjct 136761 ACCACCTTCGACACGTCGTGCAGGCGCTGGAAGTTGTACGTCTTCGAA-GCGCCAGTGCC 136703 Query 111214 TTCATTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTT 111273 ||| ||| | | || | || || || |||| ||||| || || ||||| ||| Sbjct 136702 CTCAATGA---AGGTCGGCAACGCAATCGAGGCCAGGTTGCACACGGCAGTCTCGTCCGG 136646 Query 111274 ATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTT 111333 |||| || | ||||| ||||| | ||| || ||||| ||||| || | ||||| Sbjct 136645 CGAGCTGTATTCGATGATTTCGGTACACAGGTTCGAGCTCTTGATCGTGCCGAGGTTCTT 136586 Query 111334 TTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGT 111393 ||||| ||||| |||| || |||||||| || ||| |||| | || ||||| | Sbjct 136585 CTGGTTGCTCTTGCGGTTGGCCGAGTCCTTGTACAGGATGAAGGGATTGCCGGTCTCGAT 136526 Query 111394 CTGTGATTTGAGAATAGCCTTCCAAA-CATCGGCGGCTGGTACAATGGCGTTGGCCCGTC 111452 ||| | | | ||| || | ||| | | || ||| || | | || || || || | Sbjct 136525 CTGGGCCTCCAAAATGGCGTACCAGAGCTTCTGCGCCTTGACGGAGCGC-TTCGCACGGC 136467 Query 111453 CCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGAC 111512 |||| |||||||||| ||| | ||| ||||||||||| || ||| | || | Sbjct 136466 CCTCGCGCTCGTACTTTTCGTACAAGGCATCAAACTCCTCGCCGTAGCAGTCAGCCAGGC 136407 Query 111513 CTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGA 111572 | || || | | || || | ||| ||||| | || | ||| || || ||||| Sbjct 136406 CCGGGCACTCGGCAGGGCACATAAGCGACCAGTCGCCGTTCTGCTCGACGCGGCGCATGA 136347 Query 111573 AAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTT 111632 | ||||| ||||||||||||| || || || | || |||| || | ||| | Sbjct 136346 ACAGGTCAGGAATCCACAGGGCCAGGAACAGGTCGCGCGCACGCACCTCCTCCTTACCGT 136287 Query 111633 GGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTG 111692 |||| || | |||| |||||| | | |||| |||||| ||||| || |||| | Sbjct 136286 GGTTCTTGCGCAGGTCAATGAACTCAAACACGTCCGAGTGCCACGGCTCGAGGTAGATCG 136227 Query 111693 CGATAGATCC------CTT-TCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTA 111745 | | | ||| ||| | | ||||| || | || |||||||| ||| ||| Sbjct 136226 CAAAGGCTCCGGGGCGCTTGTTGCCGCCC----TGGTCCACGTAGCGCGCAGTGTTGTTG 136171 Query 111746 AATACGCGAAGCATTGGAATAATACCAT--CTGATTGACCATTTGTCCCCCGAA--TACG 111801 | ||||| ||||| || | |||||| | |||| ||| || || || || || | Sbjct 136170 TACACGCGGAGCATCGGCACAATACCGTTGCTGA--CACCGTTCGTGCCAGCAATGTAGG 136113 Query 111802 AGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGAT 111861 || | |||| | | | ||||||| || || ||||| |||||| ||| ||| Sbjct 136112 AGCCT--GTGGCACGAATGTTGTGGATGTTCAGACCGATACCGCCAGCCGTCTTGCTGAT 136055 Query 111862 TTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGAT 111921 || || | | || || | || ||||| | || ||||| ||||| | | Sbjct 136054 CATAGCGCAGGTCTTGAGCGTGTCGTAAATACCCTCAATCGAGTCGTCCTTCATACTCAC 135995 Query 111922 AAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGC 111981 ||||||||| ||||| || || | || |||||||| ||||| ||||| || | || Sbjct 135994 AAGGAAGCAGGACGACATTTGGGGGTTAGGCGTACCAGCGTTGAACAGGGTCGGCGACGC 135935 Query 111982 GTGAATGAA--CATACCTTGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCT 112039 ||| |||| | | | | |||||| | || ||| ||||| | | | | | || Sbjct 135934 GTGCGTGAAGGCCTTC--TCGGACATGTAGTTGTAGGTCTCGATGGCGCTCTTCACATCC 135877 Query 112040 TCCCCGTGGATGCCGATTGCGACCCGCATGAACATGTACTGTGGG 112084 || ||||||||||| | || || ||||||| ||||| ||| ||| Sbjct 135876 TCGCCGTGGATGCCTACAGCAACACGCATGAGCATGTGCTGAGGG 135832 Score = 116 bits (128), Expect = 5e-21 Identities = 307/457 (67%), Gaps = 10/457 (2%) Strand=Plus/Plus Query 122369 CATAGTCCCCGACCCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCA 122428 ||||||| | || || ||| || ||||| | ||| || | || |||||| |||| Sbjct 123524 CATAGTCGGCAACGCGGCGCTCGAAAAAGTTCGACTTGCCCTGGAGCGAAATGTTCTCCA 123583 Query 122429 TAAAGTCAAATGGATTCTTCGCGTTCCAAA--TGGGTGGCACCCCAACTTGTTTGAGGAG 122486 |||||||||| || ||| ||| ||| | | || || |||| ||| ||| || Sbjct 123584 TAAAGTCAAAGGGGTTCGTCGAGTTGTAGTGCTTGG-GGTTGCCCAGGTTGAC-GAGCAG 123641 Query 122487 ACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAG-GT 122545 || || | |||| |||||||||||| | ||||| || |||||||||||| || | Sbjct 123642 GCGGTCGGCCACAAACTCAATGTACTGGCACATCAGGCGAGCGTTCATACCGATCAGCGA 123701 Query 122546 TACATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATGG 122605 ||| || || || || | || | | |||||| | || ||||| | | ||| Sbjct 123702 GACA-GGCAGAGCATCGGTCAAAAAGTCCTGCTCAATGGCCACGGCCTCGGTGATAATGC 123760 Query 122606 CGTGGATAGTTTCGGTAGTGGGT-CTATTACGCAAAGTCTTGAAGA-GCTCCACGGCAAA 122663 || | || || | ||| | | || |||| |||| | | || |||||| Sbjct 123761 GGTTCACCGTGTCAGG-GTGCGCGCGCTTCTTCAAATGGCTGAACAAGAGGCA-GGCAAA 123818 Query 122664 CTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCAT 122723 || ||| |||||||| || || || || || ||||| ||||| | ||||| ||||| Sbjct 123819 GTCGGTGTGCAGACCCTCGTCACGCGAGATGAGCTCATTGGAGAACGAAAGACCGGGCAT 123878 Query 122724 GAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTC 122783 |||||| |||||||| | ||| | || | | ||| || || ||||| ||||||||||| Sbjct 123879 GAGACCACGCTTCTTGAGCCAGAAGATCGAGGCGAACGAGCCAGAGAAAAAGATACCCTC 123938 Query 122784 CACACACGCAAACGCAAAAAGGCGTTCGGCGAAGGAG 122820 ||| ||||| || | ||||| || | ||| ||| Sbjct 123939 AACAGCGGCAAAGGCCACCAGGCGCTCCGAGAACGAG 123975 >seq75 Length=415383 Score = 114 bits (126), Expect = 2e-20 Identities = 243/359 (68%), Gaps = 8/359 (2%) Strand=Plus/Plus Query 182493 AAGTAGTGGATCATATTTAGGATGAGACCCTTGATGTGAGAACCATCATTATCGGCATCT 182552 |||| || || | ||| | ||| || ||||||||||| || |||||| || || Sbjct 132794 AAGTGGTCGAGGAAATTGATGATCAGGCCCTTGATGTGCGAGCCATCAAAGTCCTGGTCG 132853 Query 182553 GTCATAATCATAAGACGACCATAGCGAAGTTCAGAAACATCTTGGTAGTCTTTTCCTTGT 182612 ||||| ||||| || | ||| || || || || ||| | ||| ||||||| || Sbjct 132854 GTCATGATCATCAGGCTACCGTATCGCAGGCCATCCACACTGTTGTACACTTTTCCATGC 132913 Query 182613 TGAAGACCAAGGATCTTCTTGAGATCATTGAACTCCTGGTT--TGATGTAAGCTGTGCCA 182670 || | ||| || |||| ||||| || |||| ||| ||| | ||| | ||| | Sbjct 132914 TGCAAACCCAGAATCTCCTTGATATGCTTGATCTCGGCGTTCTTCATG--ATCTGGTCGT 132971 Query 182671 CCGAAGCGTCCCGAACATTCTTACATTTACCGCGAAGTGGGAACACACCGTAGTGATCAC 182730 ||| || || || ||||| |||||||| || ||||||||||| || ||||| Sbjct 132972 GCGACGCCTCACGCACATTGAGCAGCTTACCGCGTAGCGGGAACACACCATACGCATCAC 133031 Query 182731 GACCAACGACAGAGAGACCCGCAACCGCGAGGGTTTTCGCCGAATCACCCTCCGTGACAA 182790 |||| || || || ||||| || ||||||| || ||||| ||||| ||||| | | Sbjct 133032 GACCCACCTCACTGATACCCGACACGGCGAGGGCCTTGGCCGAGTCACCTTCCGTAAGGA 133091 Query 182791 TGAGAGTACACTTTCCAGATTGTGC--CGTACCCGCCTTGTTCGCGTCATCCAACTTGG 182847 | || || ||| || || || ||| || ||| ||| ||||| |||| ||||| Sbjct 133092 TCAGCGTGCAC--TCGGCGCTGCGCTTCGTGCCTGCCCAGTTGGCGTCCTCCAGCTTGG 133148 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628031081503200