Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20equina_20[genbank_20GCA_5F001264685.1_202015-08-11] 117 sequences; 7,658,883 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq74 178 2e-39 >seq74 Length=174556 Score = 178 bits (196), Expect = 2e-39 Identities = 570/867 (66%), Gaps = 33/867 (4%) Strand=Plus/Plus Query 104221 CCCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGT 104280 ||| ||| ||||| ||||||| || || | || || || || || || | | | Sbjct 135832 CCCTCAGCACATGCTCATGCGTGTTGCTGTAGGCATCCACGGCGAGGATGTGAAGAGCGC 135891 Query 104281 CTTGGAGACATACGACAAGATGTCCCAAGGTATG--TTCATTCACGCAACACCAACCCTC 104338 | | ||||| ||| || | |||||| | | | | |||| ||||| | || ||||| Sbjct 135892 CATCGAGACCTACAACTACATGTCCGA--GAAGGCCTTCACGCACGCGTCGCCGACCCTG 135949 Query 104339 TTCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAG 104398 ||||| |||||||| || | ||||||||||| ||||||||| | | ||||| Sbjct 135950 TTCAACGCTGGTACGCCTAACCCCCAAATGTCGTCCTGCTTCCTTGTGAGTATGAAGGAC 136009 Query 104399 GACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCT 104458 ||||| || | ||||| || | || || | | || || ||| ||| |||| Sbjct 136010 GACTCGATTGAGGGTATTTACGACACGCTCAAGACCTGCGCTATGATCAGCAAGACGGCT 136069 Query 104459 GGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTA--TTCGGGGGA 104516 || ||||| || || ||||||| | | | |||| | ||| || || || | Sbjct 136070 GGCGGTATCGGTCTGAACATCCACAACATTCGTGCCAC--AGGCTCCTACATTGCTGGCA 136127 Query 104517 CAAATGGTCAATCAG--ATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCG 104574 | || ||| |||| | |||||| | || ||||| ||||| | ||| ||| ||||| Sbjct 136128 CGAACGGTG--TCAGCAACGGTATTGTGCCGATGCTCCGCGTGTACAACAACACTGCGCG 136185 Query 104575 CTATGTAAATCAAGCTGGGCGTCGA-AAG------GGATCTATCGCAGTCTATCTTGAGC 104627 ||| || | || ||||| | | ||| ||| | | || |||| || |||| Sbjct 136186 CTACGTGGACCA----GGGCGGCAACAAGCGCCCCGGAGCCTTTGCGATCTACCTCGAGC 136241 Query 104628 CATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGG 104687 | |||||| |||| | | |||||| |||| |||| ||||| ||| | ||||||| Sbjct 136242 CGTGGCACTCGGACGTGTTTGAGTTCATTGACCTGCGCAAGAACCACGGTAAGGAGGAGG 136301 Query 104688 CGCGGTGC-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTT 104746 ||| ||| ||||| || ||| || || |||||||| || || |||||| | || Sbjct 136302 TGCG-TGCGCGCGACCTGTTCCTGGCCCTGTGGATTCCTGACCTGTTCATGCGCCGCGTC 136360 Query 104747 GAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCC 104806 ||| ||| ||| | ||||| || | || || | | || || || || | || | Sbjct 136361 GAGCAGAACGGCGACTGGTCGCTTATGTGCCCTGCCGAGTGCCCGGGCCTGGCTGACTGC 136420 Query 104807 GTGGGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCG 104866 || ||||||||||| ||| | ||| |||||||||| || || || |||| ||| Sbjct 136421 TACGGCGAGGAGTTTGATGCCTTGTACGAAAAGTACGAGCGCGAGGGCCGTGCGA-AGCG 136479 Query 104867 -ACGGTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTA 104924 | || | || || || | | ||| | || ||| | || | || | |||||| || | Sbjct 136480 CTCCGT-CAAGGCGCAGAAGCTCTGGTACGCCATTTTGGAGGCCCAGATCGAGACCGGCA 136538 Query 104925 CACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTG 104984 || | ||| || ||||| ||| | |||| ||||| || || ||||| | || Sbjct 136539 ATCCCTTCATCCTGTACAAGGACTCGGCCAACCGCAAGAGCAACCAGAAGAACCTCGGCA 136598 Query 104985 TGATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAG--ACAAAGATGAGAC 105042 ||||||||| || || || ||||| |||||| | ||| ||||| || ||||| Sbjct 136599 CGATCAAGAGCTCGAACCTGTGTACCGAAATCATCGAA--TACAGCTCGCCGGACGAGAC 136656 Query 105043 GGCTGTGTGTAACCTCGCATCAATCGC 105069 || ||||| ||||| || || || || Sbjct 136657 TGCCGTGTGCAACCTGGCCTCGATTGC 136683 Score = 131 bits (144), Expect = 2e-25 Identities = 120/152 (79%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 94804 GAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCT 94863 ||||| || | || ||||| ||||||||||||||| |||||||| || ||| | | Sbjct 123965 GAGCGCCTGGTGGCCTTTGCCGCTGTTGAGGGTATCTTTTTCTCTGGCTCGTTCGCCTCG 123906 Query 94864 ATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATC 94923 || | |||||||||||||| ||||||||||| ||||| | |||||||| ||||| ||| Sbjct 123905 ATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCCGGTCTTTCGTTCTCCAATGAGCTCATC 123846 Query 94924 TCTCGTGACGAGGGACTCCACCAAGAGTTTGC 94955 || ||||||||||| || ||| || ||||| Sbjct 123845 TCGCGTGACGAGGGTCTGCACACCGACTTTGC 123814 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583259946981080