Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20equina_20[genbank_20GCA_5F001264685.1_202015-08-11] 117 sequences; 7,658,883 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq83 187 8e-42 >seq83 Length=441723 Score = 187 bits (206), Expect = 8e-42 Identities = 591/904 (65%), Gaps = 13/904 (1%) Strand=Plus/Plus Query 349199 GCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGT 349258 ||| | || || ||||| ||||| || || |||||||| || || ||||| || || ||| Sbjct 214021 GCTGTTGGTATTGATTTGGGTACCACCTACTCTTGTGTGGCCGTCTGGCAGAACGACCGT 214080 Query 349259 GTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACC 349318 || || | || || || || || |||||| | || || || || |||||||| || ||| Sbjct 214081 GTTGAGGTGATCGCGAACGACCAGGGTAACCGTACGACCCCGTCGTACGTTGCCTTCACC 214140 Query 349319 GAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAAT 349378 || || |||||| |||| ||||| | || || || || | || || || | || Sbjct 214141 GACACGGAGCGTCTGATCGGTGACGCCGCCAAGAACCAGGTGGCCATGAACCCCCACAAC 214200 Query 349379 ACGGTTTTTGATGCTAAGCGACTTATTGGTAG-AAGTTTTTCTGACAAATCTACACAATC 349437 || || || || || ||||| |||||||| | ||||| | |||| || || Sbjct 214201 ACTGTCTTCGACGCCAAGCGTCTTATTGGCCGCAAGTTCAAC-GACACTGAGGTCCAGTC 214259 Query 349438 TGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATTGA 349497 || | || || | || || |||| || | | | | | || || | || Sbjct 214260 GGACATGAAGCACTGGCCCTTCGCTGTCGT--CGACCGCTCGGGC-AAGCCCGTCATCCG 214316 Query 349498 GGTTGAATATAAAGGTGAACAAAAACAATTTTTACCC--GAAGAAATTTCATCAATGGTT 349555 || || || || ||||| | || || || || | || || || || || ||||| Sbjct 214317 CGTCGAGTACAAGGGTGAGGAGAAG--ATCTTCACGCCTGAGGAGATCTCGTCGATGGTC 214374 Query 349556 TTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGG-TGAAACAGTAACTGATGCTGT 349614 | | || ||| || | || || || || | || | || || | || || || Sbjct 214375 CTGCTCAAGATGCGTGAGACCGCCGAGGCCTACCTTGGCTCGGAC-GTGAAGGACGCCGT 214433 Query 349615 TATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAG 349674 | ||||| || ||||| || || || | |||||| || || || || ||||| Sbjct 214434 GGTCACTGTCCCTGCCTACTTCAACGACTCGCAGCGTCAGGCCACCAAGGACGCTGGTGT 214493 Query 349675 CATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATA 349734 |||||| || | || ||| | | || || || || |||||||| || || || || || Sbjct 214494 CATTGCCGGCCTGAACGTTATGCGTATCATCAACGAGCCCACTGCCGCCGCTATCGCCTA 214553 Query 349735 TGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGG 349794 || || || || | | ||| || || || | || ||||| || | |||||||| Sbjct 214554 CGGTCTCGACAAGAAGGACGACGCCGAGAAGAACGTCCTGATTTTCGACCTGGGTGGTGG 214613 Query 349795 TACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGC 349854 ||| |||||||| || || || || |||| ||||| || ||||| || || || || || Sbjct 214614 TACCTTTGATGTGTCGCTCCTGACCATTGAGGAGGGTATCTTTGAGGTCAAGGCCACCGC 214673 Query 349855 TGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAA 349914 |||||| || || |||||||| || || ||||| || |||||||| || ||||| | Sbjct 214674 TGGTGACACCCACCTTGGTGGTGAGGACTTTGACAACCGTCTCGTCAACCACTTTGTGCA 214733 Query 349915 AGAATTTAAGCGTCAAG-CTAAAATTGATATTGGAGATAATCCTAGAGCAATGCGTCGCC 349973 || || ||||| |||| || | || | || || | || ||||||| | Sbjct 214734 GGAGTTCAAGCG-CAAGAACAAGAAGGACCTGACCACCAACGCTCGTGCTCTGCGTCGTC 214792 Query 349974 TAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTCTATTG 350033 || | ||||| | || ||||||||||| | | || || || |||| ||| | || | Sbjct 214793 TACGCACTGCTTCGGAGCGTGCTAAGCGCACTCTGTCGTCGGCTGCCCAGACCACCATCG 214852 Query 350034 AAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCGGTTTG 350093 | || || || || || |||| || |||| | || || || ||||| || || | Sbjct 214853 AGATCGACTCGCTGTTCGAGGGCATTGACTTCTACACCTCGATCACCCGTGCCCGCTTCG 214912 Query 350094 AAGA 350097 | || Sbjct 214913 AGGA 214916 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515252128538951