Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20equina_20[genbank_20GCA_5F001264685.1_202015-08-11] 117 sequences; 7,658,883 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq106 172 1e-37 seq111 158 3e-33 seq75 95.1 3e-14 >seq106 Length=438498 Score = 172 bits (190), Expect = 1e-37 Identities = 175/228 (77%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||||||||| || || || || | |||||| || || |||||||||||||| Sbjct 197846 ACCACCACGCAGGCGCAGCACAAGGTGGAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCT 197905 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || ||||| |||||||| || || || || || ||||||| || |||||||| || Sbjct 197906 CAGAGTGCGACCATCCTCCAGCTGCTTGCCAGCGAAGATCAGGCGCTGTTGGTCCGGAGG 197965 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 |||||||||||||| |||||||| || || || | ||||| ||||| |||| || || Sbjct 197966 GATACCCTCCTTGTCCTGGATCTTGGCCTTGACATTCTCGATCGTGTCGGAAGACTCCAC 198025 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| || |||||||| || || | ||||| ||||| | ||||| Sbjct 198026 CTCGAGGGTAATCGTCTTCCCGGTAAGGGTCTTGACGAACACTTGCAT 198073 >seq111 Length=547826 Score = 158 bits (174), Expect = 3e-33 Identities = 164/215 (76%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 282885 CGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCA 282944 ||||| || || || | ||||| || || || ||||||||||| || ||||| || Sbjct 165931 CGAAGCACGAGGTGCAGGGTGCTCTCCTTCTGAATGTTGTAGTCGCTGAGGGTGCGACCG 165872 Query 282945 TCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTG 283004 ||||| || || || ||||| ||||||| || |||||||| ||||| ||||||||| Sbjct 165871 TCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGTTGGTCCGGAGGAATGCCCTCCTTG 165812 Query 283005 TCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATC 283064 || |||||||| || || || | ||||| |||||||| | || || || || |||||| Sbjct 165811 TCCTGGATCTTGGCCTTGACATTGTCGATCGTGTCCGAGGACTCAACCTCAAGCGTGATC 165752 Query 283065 GTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| || |||| |||||| ||||| || ||||| Sbjct 165751 GTCTTGCCAGTCAGAGTCTTGACGAAGATTTGCAT 165717 >seq75 Length=415383 Score = 95.1 bits (104), Expect = 3e-14 Identities = 177/257 (69%), Gaps = 6/257 (2%) Strand=Plus/Plus Query 316948 ATGAAGTCAACGATAGACGTGTTAGATTCGGATCCGTCGAGGTCATGCTCAACATATGCA 317007 || ||||| | ||||| ||| | || || ||||||||||| ||||| || || || Sbjct 253303 ATAAAGTCCAGAATAGAAATGTCACCCTCCGAGCCGTCGAGGTCGTGCTCGACGTA-CCA 253361 Query 317008 GTTTTCAGAATATCCT---TCGTCGGGAACCCTTCCAACTGACCGTTCACAATCGCCCTC 317064 | | | | |||| || ||||| || || | |||||||||| || || | | Sbjct 253362 G--GTGCGCACCTCCTCGGGCGAGGGGAAGCCCTCGACCTGACCGTTCTGGATGGCGCGC 253419 Query 317065 ATCAGTGTCGACTTGCCAGCACCATTGGGGCCGCAAAGACCATACCGATTTCCCTTCTTC 317124 ||||| |||||||| || | ||| || | || || ||||| || || | || ||| Sbjct 253420 ATCAGGGTCGACTTACCGGAACCGTTACGACCACAGAGACCGTAGCGGTGGCCACGCTTG 253479 Query 317125 AGATTAAAACGGGTGTTGTTCAGAAGAATCTTACCACCATATGCCAGAGAGAACTCACAA 317184 || | || | ||||||| |||||||| |||| || ||||| ||||||| ||| Sbjct 253480 AGGCGCAGGGTGGCGGTGTTCAGCAGAATCTTGGCACCGTAGGCCAGCGAGAACTGACAG 253539 Query 317185 TCACACAGGTCCTCGCC 317201 | |||||| |||||||| Sbjct 253540 TTACACAGATCCTCGCC 253556 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046737630872518