Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20equina_20[genbank_20GCA_5F001264685.1_202015-08-11] 117 sequences; 7,658,883 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq106 145 5e-30 seq111 140 2e-28 >seq106 Length=438498 Score = 145 bits (160), Expect = 5e-30 Identities = 169/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 || || | ||| | || ||| ||||| |||||||||||||| ||||||||||| ||| Sbjct 197847 CCACCACGCAGGCGCAGCACAAGGTGGAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCTC 197906 Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230 || ||| | || ||||||||||| || || ||||||| ||||| || || | ||| Sbjct 197907 AGAGTGCGACCATCCTCCAGCTGCTTGCCAGCGAAGATCAGGCGCTGTTGGTCCGGAGGG 197966 Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACC 44290 | ||| ||||| ||| ||||| ||| | | | || ||||||| || |||||| Sbjct 197967 ATACCCTCCTTGTCCTGGATCTTGGCCTTGACATTCTCGATCGTGTCGGAAGACTCCACC 198026 Query 44291 TCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 || | ||||||||||| || || |||||||| ||||| | ||||||| Sbjct 198027 TCGAGGGTAATCGTCTTCCCGGTAAGGGTCTTGACGAACACTTGCATG 198074 Score = 87.8 bits (96), Expect = 1e-12 Identities = 105/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 || || | ||| | || ||| || || || ||||||||||||||||| ||||| ||| Sbjct 106797 CCACCGCGCAGACGCAGCACGAGATGCAGTGTGCTCTCCTTTTGGATATTGTAGTCGCTT 106738 Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230 || ||| | || ||||||||||| || ||||| |||| |||||||| || | || Sbjct 106737 AGAGTGCGTCCATCTTCCAGCTGCTTACCAGCAAAAATCAGGCGCTGCTGGTCCGGGGGA 106678 Query 44231 ACACCTTCCTTTTCCGTTATCTT 44253 | |||||||| ||| ||||| Sbjct 106677 ATCCCTTCCTTGTCCTGGATCTT 106655 >seq111 Length=547826 Score = 140 bits (154), Expect = 2e-28 Identities = 160/213 (75%), Gaps = 4/213 (2%) Strand=Plus/Minus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||| ||||| || ||||||||||| || |||||||| ||| ||| ||| |||| || Sbjct 165926 CACGAGGTGCAGGGTGCTCTCCTTCTGAATGTTGTAGTCGCTGAGGGTGCGACCGTCCTC 165867 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 |||||||| ||||| ||||||| ||||| || || | ||| | || ||||| ||| Sbjct 165866 GAGCTGCTTGCCGGCGAAGATCAGGCGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTG 165807 Query 44248 TATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTC 44305 ||||| ||| || ||| | || ||||| | ||| || ||||| | ||| |||||| Sbjct 165806 GATCTTGGCCTTGACATTGT--CGATCGTGTCCGAGGACTCAACCTCAAGCGTGATCGTC 165749 Query 44306 TTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 || || || || ||||| ||||||||||||||| Sbjct 165748 TTGCCAGTCAGAGTCTTGACGAAGATTTGCATG 165716 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359989886676189