Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20equina_20[genbank_20GCA_5F001264685.1_202015-08-11] 117 sequences; 7,658,883 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq106 138 3e-27 seq111 129 1e-24 >seq106 Length=438498 Score = 138 bits (152), Expect = 3e-27 Identities = 154/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||| | ||||| || || || || || || ||||| |||||||||||||| || ||| Sbjct 198070 CAAGTGTTCGTCAAGACCCTTACCGGGAAGACGATTACCCTCGAGGTGGAGTCTTCCGAC 198011 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || |||||||| ||||| ||||| |||||||| || || |||||||||||||| || Sbjct 198010 ACGATCGAGAATGTCAAGGCCAAGATCCAGGACAAGGAGGGTATCCCTCCGGACCAACAG 197951 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || |||||||| || || ||||| || ||||| | ||||| ||| || ||| || Sbjct 197950 CGCCTGATCTTCGCTGGCAAGCAGCTGGAGGATGGTCGCACTCTGAGCGACTACAACATC 197891 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || ||||| Sbjct 197890 CAGAAGGAGAGCACGCTCCACCTTGT 197865 Score = 98.7 bits (108), Expect = 2e-15 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 177996 GTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTC 178055 |||||| ||||| |||||||| ||||| || || ||||||||||| || || || || Sbjct 106646 GTCAAAACCAAGATCCAGGACAAGGAAGGGATTCCCCCGGACCAGCAGCGCCTGATTTTT 106705 Query 178056 GCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCA 178115 || || || ||||| ||||||||| | ||||| ||| || || ||||||| || Sbjct 106706 GCTGGTAAGCAGCTGGAAGATGGACGCACTCTAAGCGACTACAATATCCAAAAGGAGAGC 106765 Query 178116 ACACTGCATCTTGT 178129 ||||||||||| || Sbjct 106766 ACACTGCATCTCGT 106779 >seq111 Length=547826 Score = 129 bits (142), Expect = 1e-24 Identities = 152/206 (74%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||| || ||||| || || || |||||||| || ||||| || ||| ||| Sbjct 165720 CAAATCTTCGTCAAGACTCTGACTGGCAAGACGATCACGCTTGAGGTTGAGTCCTCGGAC 165779 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || ||||| ||||| |||||||| || || || ||||||||||| || Sbjct 165780 ACGATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCAACAG 165839 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||||||||| || |||||||| || || | || || ||| || ||| | Sbjct 165840 CGCCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGTCGCACCCTCAGCGACTACAACATT 165899 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || ||||| || || Sbjct 165900 CAGAAGGAGAGCACCCTGCACCTCGT 165925 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203729395531698