Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Malassezia_20furfur_20[genbank_20GCA_5F001264865.1_202015-08-11]
4,053 sequences; 15,232,490 total letters
Query= NC_001611.1
Length=185578
Score E
Sequences producing significant alignments: (Bits) Value
seq3973 86.0 7e-12
seq2027 84.2 3e-11
>seq3973
Length=3410
Score = 86.0 bits (94), Expect = 7e-12
Identities = 178/263 (68%), Gaps = 9/263 (3%)
Strand=Plus/Plus
Query 24125 AAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGA 24184
||||| || || || || ||| ||| ||||||||||| | || | ||||| ||
Sbjct 60 AAACAGCAGGCACGCAAAGTCGGTGTGCAGACCCTCGTCACGCGAGATGAGCTCGTTCGA 119
Query 24185 AAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCC 24244
|||| || |||||||| || || ||||| || ||||| || || || ||||| || ||
Sbjct 120 GAACGACAGGCCGGGCATCAGACCGCGCTTCTTCAGCCAGAAGATCGAGGCAAACGAGCC 179
Query 24245 AGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATAAC------C 24298
|| ||||| || || || || || ||||| || | ||| | || | | ||| |
Sbjct 180 CGAGAAGAAGATGCCCTCCACGGCGGCAAACGCCACAAGGCGCTC-CGAGAACGACGCAC 238
Query 24299 GGCGCTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGT 24358
|||| ||| ||||| | ||||| |||||||||| || || || || ||
Sbjct 239 GGCG--GTCGCTGATCCAGCGCAGCGCCCACTCGGCCTTCTGCTTCACCACCGGGATCGT 296
Query 24359 CTCTATAGCATTAAAGAGATAGT 24381
||| || ||||| || | | |||
Sbjct 297 CTCGATCGCATTGAACAAAAAGT 319
>seq2027
Length=1134
Score = 84.2 bits (92), Expect = 3e-11
Identities = 114/159 (72%), Gaps = 0/159 (0%)
Strand=Plus/Plus
Query 24125 AAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGA 24184
||||| || || || || ||| ||| ||||||||||| | || | ||||| ||
Sbjct 41 AAACAGCAGGCAGGCAAAGTCGGTGTGCAGACCCTCGTCACGCGAGATGAGCTCGTTCGA 100
Query 24185 AAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCC 24244
|||| || |||||||| || || ||||| || ||||| || || ||||| || || ||
Sbjct 101 GAACGACAGGCCGGGCATCAGACCGCGCTTCTTGAGCCAGAAGATCGACGCGAACGACCC 160
Query 24245 AGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAG 24283
|| ||||| || || || || || ||||| || | |||
Sbjct 161 CGAGAAGAAGATGCCCTCGACGGCGGCAAACGCCACAAG 199
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593691520579440
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |