Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001264865.1_202015-08-11] 4,053 sequences; 15,232,490 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq1407 208 9e-49 seq3944 201 1e-46 >seq1407 Length=2013 Score = 208 bits (230), Expect = 9e-49 Identities = 438/654 (67%), Gaps = 37/654 (6%) Strand=Plus/Minus Query 145646 TGGGAAAGGGCCGGGGGCTCCTGG-TCAGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGG 145704 |||| |||| ||| || ||| | ||||||| ||| ||| ||||| | |||| |||| Sbjct 1900 TGGGGAAGGCCCGAGG-CTCGCGCATCAGCTGCTGCTGCAGCGGCTCGATATGGTCGAGG 1842 Query 145705 TAGACGTGCGCGTCCCCCAGGACGTGGATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGG 145764 || ||||| ||||| |||| | | | |||| || | | ||| ||||||| ||| Sbjct 1841 TACACGTGAGCGTCACCCATGGCCAGCGTGAATTCGGCCGCCTCACATCCCGTGACGTGC 1782 Query 145765 GCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATG 145824 |||| | || ||| || || | |||||| || |||||||||||||| |||| |||| Sbjct 1781 GCGATGAGGTGGGTGAGTAGCGCGTAGCTCGCAATGTTGAAGGGCACGCCCAATCCCAGA 1722 Query 145825 TCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCT----------CCCCGCC--CGCC--- 145869 || | |||||||||||||| |||||| ||||||| ||| ||| |||| Sbjct 1721 TCGCACGAGCGCTGGTACATCTGGCACGAGAGCTGCGGCTTGCGCCCTGCCGCCGCCTCC 1662 Query 145870 ------------------ACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATG 145911 ||| |||| |||||||| | ||| |||||||||| |||||| Sbjct 1661 TCAGGGGTCGGCGGGGTGACGAAGAATTGGCACAGAATGTGACAGGGCGGCAAAGCCATG 1602 Query 145912 GCGGGCAGGTCCGCCGGGTTCCAGGCGGTGAGGACGAGCCTCCTGCTCTCGGGGTTCCTC 145971 |||| ||| | |||||||| || | ||| || | | | | | ||||||| || Sbjct 1601 AGTGGCATGTCAGGTGGGTTCCATGCAGAGAGCACAATGCGGCGGTCCGTGGGGTTCGTC 1542 Query 145972 TTGATCTCCCCTATCAGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTG 146031 ||||| | || | | | ||||| || || ||||| ||| ||| || || | | Sbjct 1541 TTGATTTGATGAATGACCTGCGCCAGCTGATCGACACCCTGTCCCGTGTAGTCGGTGTCG 1482 Query 146032 GAGTCCACGTACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTC- 146090 | || ||||| ||| |||||||||| ||| ||||| || ||||| || |||| ||| Sbjct 1481 GCATCAACGTATTGGGCGCCGAAGTGCCGCCATTGGAAACCATAGACCGGTCCCAAGTCG 1422 Query 146091 CCCGGGCTCCCTGTGCCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTC 146150 ||||||| | ||| || |||||| | |||||||| || || || || |||| Sbjct 1421 CCCGGGCGGCG-GTGTCCAAGCCCGCGGCTCGCGAGGAATTCAGCAGAGCCATTACCGTC 1363 Query 146151 CCAGATCTTGACGCCCCTCGCGGAGAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCA 146210 ||| || | ||| | | | | ||| || | ||||||| || || ||||| Sbjct 1362 CCAAATGTGCACGTTGCGCTCTGCCAGCCAGTTCGCGTCCGTGTTGCCTGAAATAAACCA 1303 Query 146211 GAGCAGCTCTTCGAGGACCCCCCTCCAGAAGACCCTCTTGGTGGTCAGCAGGGG 146264 ||| ||||||||||| | || | | || || | |||||||| ||||| || Sbjct 1302 GAGAAGCTCTTCGAGCATGCCGCGGAAAAATACGCGTTTGGTGGTGAGCAGTGG 1249 >seq3944 Length=27584 Score = 201 bits (222), Expect = 1e-46 Identities = 477/717 (67%), Gaps = 49/717 (7%) Strand=Plus/Plus Query 145589 CAAAGTCCTCCGCCCTGAAGTCATCTATGTC-CTC-CACCCGCCTCAGGATCCTGAGCCT 145646 ||||||| ||||| | ||| || || |||| ||| || || | | ||| | | | Sbjct 4182 CAAAGTCGTCCGCGCGGAAATCGTCAATGTTGCTCACATCCCGTTTA--ATCTTAATTGT 4239 Query 145647 GGGAAAGGGCCGGGGGCTCCTGG-TCAGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGT 145705 ||| ||||| || || ||| | ||||||| ||| || ||||| | |||||||||| Sbjct 4240 GGGGAAGGGTCGCGG-CTCGCGCATCAGCTGCTGCTGCAACGGCTCAATATGGTTGAGGT 4298 Query 145706 AGACGTGCGCGTCCCCCAGGACGTGGATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGG 145765 | ||||| ||||| |||| | | | |||| || | | ||| ||||| | || | Sbjct 4299 ATACGTGAGCGTCACCCATGGCCAGCGTGAATTCGGCCGCTTCGCATCCCGTCACATGTG 4358 Query 145766 CGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGT 145825 ||| | || ||| || || | || || || |||||||||||||| |||| ||||| | Sbjct 4359 CGATGAGGTGGGTGAGTAGCGCATAACTTGCAATGTTGAAGGGCACGCCCAACCCCAGAT 4418 Query 145826 CCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCC----------------CCGCC---- 145865 | | |||||||||||||| |||||| ||||||| | ||||| Sbjct 4419 CGCACGAGCGCTGGTACATCTGGCATGAGAGCTGCGGCTTGCGTCCCACCGCCGCCTCTT 4478 Query 145866 -------CGCCACGT------AGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGG 145912 || || | |||| ||||||| || || ||||| |||| |||||| Sbjct 4479 CAGGGTTCGGCAGGGTGACAAAGAATTGGCACAAGATATGACAGGGTGGCAATGCCATGA 4538 Query 145913 CGGGCAGGTCCGCCGGGTTCCAGGCGGTGAGGACGAGCCTCCTGCTCTC---GGGGTTCC 145969 || ||||| | |||||||| |||| ||| || | | | || || ||||||| Sbjct 4539 GCGGTAGGTCAGGTGGGTTCCATGCGGAGAGCACAA---TGCGGCGGTCAGTGGGGTTCG 4595 Query 145970 TCTTGATCTCCCCTATCAG--GTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGT 146027 ||||||| | || | || || |||||||| || ||||||||| || || || Sbjct 4596 TCTTGATTTGATGAATGACCTGTGCC--AGCTGGTCTACACCCTGCCCCGTATAGTCGGT 4653 Query 146028 CTTGGAGTCCACGTACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAG 146087 | || ||| |||||| ||| || ||||||| ||| ||||| ||||| || || |||| Sbjct 4654 GTCGGCGTCGACGTACTGGGCGCCAAAGTGCCGCCATTGGAAGCCGTACACCGGTCCCAA 4713 Query 146088 GTCCCCGGGCTCCCTGTGCCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGC 146147 ||| || || | ||| || || ||| | |||||||| || ||| || ||| | Sbjct 4714 GTCGCCCGGACGACGGTGTCCGAGTCCGCGACTCGCGAGGAATTCGGCGGAGCCATTGCC 4773 Query 146148 GTCCCAGATCTTGACGCCCCTCGCGGAGAGCTCATTGGAGTCCGTGGACCCCCTGATGAA 146207 |||||||| | ||| | | | | ||| |||| |||||| ||| || || Sbjct 4774 ATCCCAGATGTGCACGTTGCGCTCCGCCAGCCAGTTGGCATCCGTGTTGCCCGAAATAAA 4833 Query 146208 CCAGAGCAGCTCTTCGAGGACCCCCCTCCAGAAGACCCTCTTGGTGGTCAGCAGGGG 146264 |||||| ||||||||||| || || | |||| || | |||||||| ||||| || Sbjct 4834 CCAGAGAAGCTCTTCGAGTACGCCACGGAAGAAAACGCGTTTGGTGGTGAGCAGCGG 4890 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590046905234120