Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001264865.1_202015-08-11] 4,053 sequences; 15,232,490 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq1186 120 3e-22 seq1579 116 4e-21 seq1887 102 9e-17 >seq1186 Length=2681 Score = 120 bits (132), Expect = 3e-22 Identities = 144/193 (75%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || || || || |||| || |||||||| || || || Sbjct 2472 CTCCTTCTGGATGTTGTAGTCGCTGAGCGTGCGGCCGTCCTCGAGCTGCTTGCCCGCAAA 2413 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||| | || | | |||||||||| || || |||| || Sbjct 2412 GATGAGCCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGACCTTGGACTTGA-CGA 2354 Query 43112 CGCC-ACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170 || | | |||||||||||| || || |||| |||||| || |||||||| |||||||| | Sbjct 2353 CGTCGATCGTGTCGCTCGACTCGACCTCGAGCGTGATCGTCTTGCCCGTGAGCGTCTTGA 2294 Query 43171 CAAAGATTTGCAT 43183 ||||||||||| Sbjct 2293 TGAAGATTTGCAT 2281 >seq1579 Length=1639 Score = 116 bits (128), Expect = 4e-21 Identities = 143/193 (74%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || || || || |||| || |||||||| || || || Sbjct 1434 CTCCTTCTGGATGTTGTAGTCGCTGAGCGTGCGGCCGTCTTCGAGCTGCTTGCCCGCAAA 1375 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 || || ||||| ||||| | || | || |||||||||| || || |||| || Sbjct 1374 GATCAGGCGCTGTTGGTCCGGGGGGATGCCCTCCTTGTCCTGGACCTTGGACTTGA-CGA 1316 Query 43112 CGCC-ACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170 || | | |||||||||||| || || |||| |||||| || |||||||| |||||||| | Sbjct 1315 CGTCGATCGTGTCGCTCGACTCGACCTCGAGCGTGATCGTCTTGCCCGTGAGCGTCTTGA 1256 Query 43171 CAAAGATTTGCAT 43183 ||||||||||| Sbjct 1255 TGAAGATTTGCAT 1243 >seq1887 Length=20729 Score = 102 bits (112), Expect = 9e-17 Identities = 140/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || |||||| || |||| || || |||||||| ||||| Sbjct 2272 CTCCTTCTGGATGTTGTAGTCGCTCAGAGTACGACCGTCTTCCAGTTGCTTACCGGCGAA 2213 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 43110 || || ||||||||||| | || | | |||||||||| ||| | || | || | Sbjct 2212 GATCAGGCGCTGCTGGTCCGGGGGAATACCCTCCTTGTCC-TGAATCTTGGCCTTCACAT 2154 Query 43111 TCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170 | | | ||| ||| ||||||||| || | |||||| || ||||| || |||||||| | Sbjct 2153 TTTCAATCGTATCGGACGATTCCACTTCCAGCGTGATCGTCTTGCCAGTGAGCGTCTTGA 2094 Query 43171 CAAAGATTTGCAT 43183 | || | ||||| Sbjct 2093 CGAACACCTGCAT 2081 Score = 102 bits (112), Expect = 9e-17 Identities = 140/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || |||||| || |||| || || |||||||| ||||| Sbjct 2728 CTCCTTCTGGATGTTGTAGTCGCTCAGAGTACGACCGTCTTCCAGTTGCTTACCGGCGAA 2669 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 43110 || || ||||||||||| | || | | |||||||||| ||| | || | |||| Sbjct 2668 GATCAGGCGCTGCTGGTCCGGGGGAATACCCTCCTTGTCC-TGAATCTTGGCCTTGACGT 2610 Query 43111 TCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170 || | | |||||| ||||||||| || | |||||| || || || || || ||||| | Sbjct 2609 TCTCGATAGTGTCGGACGATTCCACTTCCAGCGTGATCGTCTTACCAGTGAGTGTCTTGA 2550 Query 43171 CAAAGATTTGCAT 43183 | || | ||||| Sbjct 2549 CGAACACCTGCAT 2537 Score = 96.9 bits (106), Expect = 4e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 ||||| || || ||||| || ||| || || || || || |||||||| |||||||| Sbjct 1815 TCCTTCTGGATGTTGTAGTCGCTCAGCGTACGGTCATCCTCAAGCTGCTTGCCAGCGAAG 1756 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112 || || ||||||||||| | || | | |||||||||| ||| || |||| || Sbjct 1755 ATAAGGCGCTGCTGGTCCGGGGGAATACCCTCCTTGTCCTGGATCTTGGCCTTGACGTTC 1696 Query 43113 GCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 43172 | | ||||||| ||| || || |||| ||| || || || || || || ||||| || Sbjct 1695 TCGATCGTGTCGGACGACTCGACCTCGAGCGTAATCGTCTTTCCTGTCAGGGTCTTAACG 1636 Query 43173 AAGATTTGCAT 43183 || | ||||| Sbjct 1635 AAAACCTGCAT 1625 Score = 84.2 bits (92), Expect = 3e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 ||||| || |||||||| || || || || | || || || ||||| || || || Sbjct 2043 TCCTTCTGGATATTGTAGTCGCTAAGCGTACGGCCATCCTCAAGTTGCTTGCCGGCAAAG 1984 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112 || || ||||||||||| | || | || |||||||||| ||| || || | || Sbjct 1983 ATCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTAGCCTTCACGTTC 1924 Query 43113 GCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 43172 | | |||||| || || || |||| |||||| || |||||||| || ||||| || Sbjct 1923 TCGATCGTGTCCGAGGACTCGACCTCGAGCGTGATAGTCTTGCCCGTAAGAGTCTTGACG 1864 Query 43173 AAGATTTGCAT 43183 || | ||||| Sbjct 1863 AACACCTGCAT 1853 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571788630290840