Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001264865.1_202015-08-11] 4,053 sequences; 15,232,490 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq1526 113 1e-19 seq1860 95.1 3e-14 seq3390 86.0 1e-11 >seq1526 Length=1772 Score = 113 bits (124), Expect = 1e-19 Identities = 189/266 (71%), Gaps = 8/266 (3%) Strand=Plus/Minus Query 254011 TGCTTTTCCACGGTCCTCCCGGAACAGGCAAGACGTCAACCATCCTGGCGCTGGCCCGAA 254070 |||| ||| |||| || ||||| || ||||||||||| || ||| ||||||| || || Sbjct 1540 TGCTGTTCTACGGCCCGCCCGGCACGGGCAAGACGTCGACGATCATGGCGCTCGCGCGCC 1481 Query 254071 CCCTGTTGGGCGAGGGGAACATGAGAGAGCGCGTGCTCGAGCTGAACGCTTCTGACGAAC 254130 |||| ||| || | || || | | |||||||||||||||||| || ||||| | Sbjct 1480 GGCTGTACGGCAAGCAGTTCAAGA---ACCACGTGCTCGAGCTGAACGCGTCCGACGACC 1424 Query 254131 GCGGGTTGGACGTCGTCCGCGACAAGATCAAGACTTTCTCCAAGATGTCGATTTCGTCGT 254190 |||| | |||||||| |||| |||||||| | ||| | | | | || ||| || Sbjct 1423 GCGGCATCGACGTCGTGCGCGGGCAGATCAAGTCGTTCGCGAGCACG-CG-CAACGT-GT 1367 Query 254191 TC-CAACCCGGCTGTCCGCCTTTCAAGCTCGTGATCCTGGACGAGGCGGACACCATGACG 254249 || || | || | | | |||||||| | | || |||||||| ||| |||||||| Sbjct 1366 TCAGCACGCAGCAGGAC-ACGTTCAAGCTGATCGTGCTCGACGAGGCCGACGCCATGACG 1308 Query 254250 GCCGACGCGCAGTCCGCCCTCCGCCG 254275 | ||||||| |||| ||||| || Sbjct 1307 CAGGCCGCGCAGGCCGCGCTCCGGCG 1282 >seq1860 Length=1314 Score = 95.1 bits (104), Expect = 3e-14 Identities = 185/266 (70%), Gaps = 8/266 (3%) Strand=Plus/Minus Query 254011 TGCTTTTCCACGGTCCTCCCGGAACAGGCAAGACGTCAACCATCCTGGCGCTGGCCCGAA 254070 |||| ||| |||| || || || || ||||||||||| || ||| ||||||| || || Sbjct 1063 TGCTCTTCTACGGCCCGCCGGGCACGGGCAAGACGTCGACGATCATGGCGCTCGCGCGCC 1004 Query 254071 CCCTGTTGGGCGAGGGGAACATGAGAGAGCGCGTGCTCGAGCTGAACGCTTCTGACGAAC 254130 |||| || || | || || | | |||||| ||||||||||| || ||||| | Sbjct 1003 GGCTGTACGGGAAGCAGTTCAAGA---ACCACGTGCTGGAGCTGAACGCGTCCGACGACC 947 Query 254131 GCGGGTTGGACGTCGTCCGCGACAAGATCAAGACTTTCTCCAAGATGTCGATTTCGTCGT 254190 |||| | |||||||| |||| |||||||| | ||| | | | | || ||| || Sbjct 946 GCGGCATCGACGTCGTGCGCGGGCAGATCAAGTCGTTCGCGAGCACG-CG-CAACGT-GT 890 Query 254191 TC-CAACCCGGCTGTCCGCCTTTCAAGCTCGTGATCCTGGACGAGGCGGACACCATGACG 254249 || || | || | | | |||||||| | | || |||||||||||| |||||||| Sbjct 889 TCAGCACACAGCAGGAC-ACGTTCAAGCTGATCGTGCTCGACGAGGCGGACGCCATGACG 831 Query 254250 GCCGACGCGCAGTCCGCCCTCCGCCG 254275 | |||||| | || ||||| || Sbjct 830 CAGGCGGCGCAGGCGGCGCTCCGGCG 805 >seq3390 Length=37458 Score = 86.0 bits (94), Expect = 1e-11 Identities = 94/125 (75%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 115402 ATCGCACATCTGCTCTGAATCGGTTCGATGATTTTGGTGGAGTTGTTGCAGACTATGATG 115461 |||||||| | |||||||||||||| ||||| ||| |||| | |||||| | | | | Sbjct 36572 ATCGCACAGCGACTCTGAATCGGTTCAATGATCTTGTTGGACTGGTTGCACGCGAAGCAG 36513 Query 115462 AACCGCGTCGTGCTCGAGTAAACATCCATGATCCGTCGCAGCGCCTGGAAAGCACCAGGT 115521 || ||||||||| | | |||| ||||| | || || |||||||| ||||| ||| Sbjct 36512 AAGCGCGTCGTGTTGGCATAAATCTCCATCGTACGGCGTAGCGCCTGCTGCGCACCGGGT 36453 Query 115522 GTCAT 115526 ||||| Sbjct 36452 GTCAT 36448 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073710640317504