Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001264865.1_202015-08-11] 4,053 sequences; 15,232,490 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq1887 111 1e-19 seq1831 111 1e-19 seq1186 109 4e-19 seq1321 93.3 3e-14 seq1326 86.0 5e-12 >seq1887 Length=20729 Score = 111 bits (122), Expect = 1e-19 Identities = 147/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 ||| ||||| ||||||||| |||||||||||| |||| ||| |||| |||||||| Sbjct 2740 GTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGAGTACGACCGTCTTCCAGTTG 2681 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 || |||||||| |||| ||||| ||||| || || | ||||||||||||| ||| || Sbjct 2680 CTTACCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATACCCTCCTTGTCCTGAATCTT 2621 Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312 ||| || | | | |||| ||||| |||| || |||||||| || || Sbjct 2620 GGCCTTGACGTTCTCGATAGTGTCGGACGATTCCACTTCCAGCGTGATCGTCTTACCAGT 2561 Query 45313 CAGAGTCTTCACAAAGATTTGCAT 45336 || ||||| || || | ||||| Sbjct 2560 GAGTGTCTTGACGAACACCTGCAT 2537 Score = 107 bits (118), Expect = 2e-18 Identities = 146/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 ||| ||||| ||||||||| |||||||||||| |||| ||| |||| |||||||| Sbjct 2284 GTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGAGTACGACCGTCTTCCAGTTG 2225 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 || |||||||| |||| ||||| ||||| || || | ||||||||||||| ||| || Sbjct 2224 CTTACCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATACCCTCCTTGTCCTGAATCTT 2165 Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312 ||| || | | | || ||||| |||| || ||||||||||| || Sbjct 2164 GGCCTTCACATTTTCAATCGTATCGGACGATTCCACTTCCAGCGTGATCGTCTTGCCAGT 2105 Query 45313 CAGAGTCTTCACAAAGATTTGCAT 45336 || ||||| || || | ||||| Sbjct 2104 GAGCGTCTTGACGAACACCTGCAT 2081 Score = 98.7 bits (108), Expect = 8e-16 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 ||| ||||| |||||||| |||||||||||| | || || | || || || || Sbjct 2512 GTGAAGCGTCGATTCCTTCTGGATGTTGTAGTCGCTAAGCGTACGGCCATCCTCAAGCTG 2453 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 || ||||| || |||| ||||||||||| || || | ||||||||||||| ||| || Sbjct 2452 CTTGCCGGCAAAGATCAGGCGCTGTTGGTCCGGGGGAATACCCTCCTTGTCCTGAATCTT 2393 Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312 ||| || | | | |||| ||| ||||| | ||||| ||||||||||| Sbjct 2392 GGCCTTGACGTTCTCGATCGTGTCGGACGACTCGACCTCGAGCGTAATGGTCTTGCCCGT 2333 Query 45313 CAGAGTCTTCACAAAGATTTGCAT 45336 |||||||| || || | ||||| Sbjct 2332 AAGAGTCTTGACGAACACCTGCAT 2309 Score = 84.2 bits (92), Expect = 2e-11 Identities = 141/204 (69%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 ||| ||||| |||||||| || ||||||||| | || || | || || ||||| Sbjct 2056 GTGAAGCGTCGATTCCTTCTGGATATTGTAGTCGCTAAGCGTACGGCCATCCTCAAGTTG 1997 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 || ||||| || |||| ||||| ||||| || || | |||||||||||| || || Sbjct 1996 CTTGCCGGCAAAGATCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTT 1937 Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312 ||| || | | | ||||| ||| ||||| | || || ||||||||||| Sbjct 1936 AGCCTTCACGTTCTCGATCGTGTCCGAGGACTCGACCTCGAGCGTGATAGTCTTGCCCGT 1877 Query 45313 CAGAGTCTTCACAAAGATTTGCAT 45336 |||||||| || || | ||||| Sbjct 1876 AAGAGTCTTGACGAACACCTGCAT 1853 >seq1831 Length=21170 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||||||| ||||| ||||||||| |||||||||||| |||| || | || || Sbjct 209 ACCAAGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTACGGCCATCCTCG 150 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || || || || || |||| ||||||||||| ||||| | |||||||| || | Sbjct 149 AGCTGCTTGCCCGCAAAGATCAGACGCTGTTGGTCCGGAGGAATGCCCTCCTTATCTTGA 90 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | | |||| ||||| |||| |||||||||||| Sbjct 89 ATCTTCGCCTTCACGTTTTCAATGGTGTCAGACGATTCCACTTCCAATGTAATCGTCTTG 30 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 ||||| || ||||| || |||| |||||| Sbjct 29 CCCGTAAGGGTCTTGACGAAGACTTGCAT 1 Score = 111 bits (122), Expect = 1e-19 Identities = 147/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 ||| ||||| ||||||||||||||||||||| | || ||| | || || || || Sbjct 432 GTGAAGCGTCGACTCCTTCTGAATGTTGTAGTCACTGAGCGTGCGGCCATCCTCAAGCTG 373 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 || || || || |||| ||||||||||| ||||| | |||||||||||| ||| || Sbjct 372 CTTGCCAGCAAAGATCAGACGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGAATCTT 313 Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312 ||| || | | | ||||| ||| || || | ||||||||||||||||| Sbjct 312 CGCCTTGACGTTCTCGATCGTGTCCGAGGACTCAACTTCGAGCGTAATCGTCTTGCCCGT 253 Query 45313 CAGAGTCTTCACAAAGATTTGCAT 45336 || ||||| || |||| |||||| Sbjct 252 AAGGGTCTTGACGAAGACTTGCAT 229 >seq1186 Length=2681 Score = 109 bits (120), Expect = 4e-19 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||| ||| ||||| ||||||||| |||||||||||| | || ||| |||| || Sbjct 2489 ACCAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTGAGCGTGCGGCCGTCCTCG 2430 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || || || || || || | |||||| ||||| || || | ||||||||||||| Sbjct 2429 AGCTGCTTGCCCGCAAAGATGAGCCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGG 2370 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 | || ||| || | | | |||| | ||| ||||| | || ||||||||| Sbjct 2369 ACCTTGGACTTGACGACGTCGATCGTGTCGCTCGACTCGACCTCGAGCGTGATCGTCTTG 2310 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATG 45337 ||||| || ||||| | |||||||||||| Sbjct 2309 CCCGTGAGCGTCTTGATGAAGATTTGCATG 2280 >seq1321 Length=24366 Score = 93.3 bits (102), Expect = 3e-14 Identities = 144/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 ||| ||||| ||||||||| |||||||||||| |||| || | || || || || Sbjct 73 GTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTACGGCCATCCTCGAGCTG 132 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 || || || || |||| ||||||||||| ||||| | ||||||||||| || || Sbjct 133 CTTGCCCGCAAAGATCAGACGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCTTGGATCTT 192 Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312 | ||| || | | | |||| ||| || || | || |||||||| || || Sbjct 193 TGCCTTGACGTTCTCGATCGTGTCGGACGACTCGACTTCGAGTGTGATCGTCTTTCCTGT 252 Query 45313 CAGAGTCTTCACAAAGATTTGCATGT 45338 ||||||||| || || | ||||||| Sbjct 253 CAGAGTCTTTACGAAAACCTGCATGT 278 >seq1326 Length=2175 Score = 86.0 bits (94), Expect = 5e-12 Identities = 91/120 (76%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 45125 AATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCG 45184 || || | ||||||||| ||||||||| |||||||||||| |||| ||| |||| Sbjct 316 AAAACGAGGTGCAGCGTAGACTCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGCCCGTCC 257 Query 45185 TCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244 || || || || ||||| || || | ||||| || ||||| || | |||||||||||| Sbjct 256 TCGAGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGATCGGGCGGAATGCCCTCCTTGTCC 197 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395055684890113