Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001264865.1_202015-08-11] 4,053 sequences; 15,232,490 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq3973 107 2e-18 seq2027 96.9 4e-15 >seq3973 Length=3410 Score = 107 bits (118), Expect = 2e-18 Identities = 389/603 (65%), Gaps = 18/603 (3%) Strand=Plus/Plus Query 33572 AAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGA 33631 ||||| || || || || ||| ||||||||||||||| | || | ||||| || Sbjct 60 AAACAGCAGGCACGCAAAGTCGGTGTGCAGACCCTCGTCACGCGAGATGAGCTCGTTCGA 119 Query 33632 AAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCC 33691 |||| || |||||||| || || ||||| || ||||| || || || || || || || Sbjct 120 GAACGACAGGCCGGGCATCAGACCGCGCTTCTTCAGCCAGAAGATCGAGGCAAACGAGCC 179 Query 33692 GGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAAC------C 33745 || |||||||| || || || || ||||| || | ||| | ||| | | ||| | Sbjct 180 CGAGAAGAAGATGCCCTCCACGGCGGCAAACGCCACAAGGCGCTC-CGAGAACGACGCAC 238 Query 33746 GGCGCTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGT 33805 |||| ||| ||||| | ||||| |||||||||| || || || ||||| Sbjct 239 GGCG--GTCGCTGATCCAGCGCAGCGCCCACTCGGCCTTCTGCTTCACCACCGGGATCGT 296 Query 33806 TTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAA 33865 || || ||||| || | | ||| | | || | || || || || | Sbjct 297 CTCGATCGCATTGAACAAAAAGTCGCGCTGCTCCGGCTCGCGGATGTACGTGTCAATGAG 356 Query 33866 AAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCT 33925 || || | ||||| || ||||| ||||| ||||| || |||||||| || | Sbjct 357 CAGCGAGTAGGTCTCCGAGTGGATGTTCTCAATCATGATCTGGAAACCGTAGAAGCAGCG 416 Query 33926 AGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTCTGCTAAA--TTTTCATTCACTATT 33983 ||||||| |||||| || | | ||| ||||| | ||| || || || || || Sbjct 417 CGCCTCGGCGGCCTGCACCTCGGAGCTAAAGCGTTC--CAAAAGGTTCTCGTTGACAATC 474 Query 33984 CCATCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTT 34043 || || || ||||| ||||| | || || | ||||| | |||| || ||| Sbjct 475 CCGTCCGACGCCGCAAAGAACGCAAGGACGTGGCTGATAAAGTGGCGCTCGT-TGTCGTT 533 Query 34044 ----AGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAA 34099 | || | ||| || | | || || || | || | || || | ||||| || Sbjct 534 CAGGCGGTTGTCCCAGTCGTGCAGGTCCTTGGACAGGTCGATCTCCTCGGCGGTCCAGAA 593 Query 34100 TGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAAC 34159 || ||||| ||||| || ||||| | ||| || || || || |||| ||||| | || Sbjct 594 CGACGCCTCGGCCTTCTTGTACATCTGCCAAATCTCGTGGTAGCGGATGGGGAACAGGAC 653 Query 34160 AAA 34162 ||| Sbjct 654 AAA 656 >seq2027 Length=1134 Score = 96.9 bits (106), Expect = 4e-15 Identities = 387/605 (64%), Gaps = 22/605 (4%) Strand=Plus/Plus Query 33572 AAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGA 33631 ||||| || || || || ||| ||||||||||||||| | || | ||||| || Sbjct 41 AAACAGCAGGCAGGCAAAGTCGGTGTGCAGACCCTCGTCACGCGAGATGAGCTCGTTCGA 100 Query 33632 AAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCC 33691 |||| || |||||||| || || ||||| || ||||| || || || ||||| || || Sbjct 101 GAACGACAGGCCGGGCATCAGACCGCGCTTCTTGAGCCAGAAGATCGACGCGAACGACCC 160 Query 33692 GGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAAC------C 33745 || |||||||| || || || || ||||| || | ||| | ||| | | ||| | Sbjct 161 CGAGAAGAAGATGCCCTCGACGGCGGCAAACGCCACAAGGCGCTC-CGAGAACGACGCAC 219 Query 33746 GGCGCTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGT 33805 |||| ||| ||||| | ||||| |||||||| | || || || ||||| Sbjct 220 GGCG--GTCGCTGATCCAGCGCAGCGCCCACTCGGCCTTTTGCTTCACCACCGGGATCGT 277 Query 33806 TTCTATGGCATTAAAGAGATAGtttttttCATTACT----ATCTTTAACATAAGTATCGA 33861 || || ||||| || || | || | | || || || || || || | Sbjct 278 CTCGATCGCATTGAACAGGAA----TTCACGCTGCTCCGGCTCGCGAATGTACGTGTCAA 333 Query 33862 TCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAAC 33921 | | || || | ||||| || ||||| ||||| ||||| || ||||| || | Sbjct 334 TGAGCAGCGAGTAGGTCTCCGAGTGGATGTTCTCAATCATGATCTGGAAACCGTAAAAGC 393 Query 33922 ATCTAGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTA 33981 | | ||||||| |||||| || | | || || || | || || || || | Sbjct 394 AGCGCGCCTCGGCGGCCTGCACCTCCGAGCTGAAGCGCTCCAAGAGGTTCTCGTTGACAA 453 Query 33982 TTCCATCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTG 34041 | || || || ||||| ||||| | || || | ||||| | |||| || | Sbjct 454 TCCCGTCCGACGCGGCAAAGAACGCAAGGACGTGGCTGATAAAGTGGCGCTCGT-TGTCG 512 Query 34042 TT----AGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAA 34097 || | || | ||| || | | || || || | || | || || | ||||| Sbjct 513 TTCAGGCGGTTGTCCCAGTCGTGCAGGTCCTTGGACAGGTCAATCTCCTCGGCGGTCCAG 572 Query 34098 AATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAATA 34157 || || ||||| ||||| || ||||| | |||||| || || || |||| ||||| | Sbjct 573 AACGACGCCTCGGCCTTCTTGTACATTTGCCAGATTTCGTGGTAGCGGATGGGGAACAGG 632 Query 34158 ACAAA 34162 ||||| Sbjct 633 ACAAA 637 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629785691865840