Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001264865.1_202015-08-11] 4,053 sequences; 15,232,490 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq3973 91.5 2e-13 seq2027 86.0 8e-12 >seq3973 Length=3410 Score = 91.5 bits (100), Expect = 2e-13 Identities = 385/601 (64%), Gaps = 14/601 (2%) Strand=Plus/Plus Query 36148 AAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGA 36207 ||||| || || || || ||| ||| ||||||||||| | || | ||||| || Sbjct 60 AAACAGCAGGCACGCAAAGTCGGTGTGCAGACCCTCGTCACGCGAGATGAGCTCGTTCGA 119 Query 36208 AAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCC 36267 |||| || |||||||| || || ||||| || ||||| || || || ||||| || || Sbjct 120 GAACGACAGGCCGGGCATCAGACCGCGCTTCTTCAGCCAGAAGATCGAGGCAAACGAGCC 179 Query 36268 AGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAAC-CGGCA- 36325 || ||||| || || || || || ||||| || | ||| | ||| | | ||| ||| Sbjct 180 CGAGAAGAAGATGCCCTCCACGGCGGCAAACGCCACAAGGCGCTC-CGAGAACGACGCAC 238 Query 36326 --CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCT 36383 | ||| ||||| | ||||| |||||||||| || || || || |||| Sbjct 239 GGCGGTCGCTGATCCAGCGCAGCGCCCACTCGGCCTTCTGCTTCACCACCGGGATCGTCT 298 Query 36384 CTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAA 36443 | || ||||| || | | ||| | | || | || || ||||| | | Sbjct 299 CGATCGCATTGAACAAAAAGTCGCGCTGCTCCGGCTCGCGGATGTACGTGTCAATGAGCA 358 Query 36444 GACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAG 36503 | || | ||||| || ||||| ||||| || || || |||||||| || | | Sbjct 359 GCGAGTAGGTCTCCGAGTGGATGTTCTCAATCATGATCTGGAAACCGTAGAAGCAGCGCG 418 Query 36504 CCTCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAA--TTTTCATTCACTATTCC 36561 |||||| ||| || || | | ||| ||||| | ||| || || || || || || Sbjct 419 CCTCGGCGGCCTGCACCTCGGAGCTAAAGCGTTC--CAAAAGGTTCTCGTTGACAATCCC 476 Query 36562 GTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTTTGGTGTT-- 36619 ||| || ||||| ||||| | || || | ||||| | ||| ||| ||| Sbjct 477 GTCCGACGCCGCAAAGAACGCAAGGACGTGGCTGATAAAGTGGCGCTCG-TTGTCGTTCA 535 Query 36620 --AGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATG 36677 | || | ||| || | | || || || | || | || || | ||||| || | Sbjct 536 GGCGGTTGTCCCAGTCGTGCAGGTCCTTGGACAGGTCGATCTCCTCGGCGGTCCAGAACG 595 Query 36678 ATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAA 36737 | ||||| ||||| || ||||| | ||| || || || || | || || || | |||| Sbjct 596 ACGCCTCGGCCTTCTTGTACATCTGCCAAATCTCGTGGTAGCGGATGGGGAACAGGACAA 655 Query 36738 A 36738 | Sbjct 656 A 656 >seq2027 Length=1134 Score = 86.0 bits (94), Expect = 8e-12 Identities = 118/165 (72%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 36148 AAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGA 36207 ||||| || || || || ||| ||| ||||||||||| | || | ||||| || Sbjct 41 AAACAGCAGGCAGGCAAAGTCGGTGTGCAGACCCTCGTCACGCGAGATGAGCTCGTTCGA 100 Query 36208 AAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCC 36267 |||| || |||||||| || || ||||| || ||||| || || ||||| || || || Sbjct 101 GAACGACAGGCCGGGCATCAGACCGCGCTTCTTGAGCCAGAAGATCGACGCGAACGACCC 160 Query 36268 AGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTC 36312 || ||||| || || || || || ||||| || | ||| | ||| Sbjct 161 CGAGAAGAAGATGCCCTCGACGGCGGCAAACGCCACAAGGCGCTC 205 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658139455320520