Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001264865.1_202015-08-11] 4,053 sequences; 15,232,490 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq3347 96.9 2e-15 seq3973 91.5 1e-13 seq3278 87.8 1e-12 >seq3347 Length=11639 Score = 96.9 bits (106), Expect = 2e-15 Identities = 115/151 (76%), Gaps = 4/151 (3%) Strand=Plus/Plus Query 33571 CCAGAGATGGGCGACAAGTTTGCATCG-TTCACGGCCCAGAAGGGCACGTGCGGCATGAT 33629 || ||| ||||||||||||| | ||| ||||| |||||||||| |||||| |||| Sbjct 11198 CCGGAGCTGGGCGACAAGTTCTCCTCGCGCCACGG-CCAGAAGGGCGTGTGCGGGCTGAT 11256 Query 33630 -GTACGACCAGTGGGACATGCCGTTCACGGCCGACGGCGTGGTCCCGGACCTAGTCATCA 33688 || | | ||| ||||||||||||||| | | | ||| | ||||||| | |||| | Sbjct 11257 CGTGC-AGCAGGAGGACATGCCGTTCACCGACCAGGGCATCTGCCCGGACATCATCATGA 11315 Query 33689 ACCCGCATGCGTTCCCCTCGCGCATGACGGT 33719 ||||||| | ||||| ||||||||||| || Sbjct 11316 ACCCGCACGGCTTCCCGTCGCGCATGACCGT 11346 >seq3973 Length=3410 Score = 91.5 bits (100), Expect = 1e-13 Identities = 113/155 (73%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 22748 TGGCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATATTCTGGC 22807 |||| ||||| || || || ||| || | || || || || ||||| | || ||||||| Sbjct 214 TGGCGTTTGCCGCCGTGGAGGGCATCTTCTTCTCGGGCTCGTTTGCCTCGATCTTCTGGC 155 Query 22808 TGAAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGCCGTGACG 22867 ||||||| || || ||||| || || |||| || |||||| | || ||||||| Sbjct 154 TGAAGAAGCGCGGTCTGATGCCCGGCCTGTCGTTCTCGAACGAGCTCATCTCGCGTGACG 95 Query 22868 AAGGTCTACACTGTGACTTTGCTTGTATGCTGTTT 22902 | ||||| ||| |||||||| || |||||||| Sbjct 94 AGGGTCTGCACACCGACTTTGCGTGCCTGCTGTTT 60 >seq3278 Length=77981 Score = 87.8 bits (96), Expect = 1e-12 Identities = 113/151 (75%), Gaps = 4/151 (3%) Strand=Plus/Minus Query 33571 CCAGAGATGGGCGACAAGTTTGCATCGTTC-ACGGCCCAGAAGGGCACGTGCGGCATGAT 33629 || ||| ||||||||||||| | ||| | |||||| | |||||| ||| || |||| Sbjct 3164 CCCGAGCTGGGCGACAAGTTCTCCTCGCGCCACGGCCAA-AAGGGCGTGTGTGGGCTGAT 3106 Query 33630 -GTACGACCAGTGGGACATGCCGTTCACGGCCGACGGCGTGGTCCCGGACCTAGTCATCA 33688 || | | ||| ||||||||||||||| | | | ||| | ||||||| | |||| | Sbjct 3105 CGTGC-AGCAGGAGGACATGCCGTTCACCGACCAGGGCATCTGCCCGGACATCATCATGA 3047 Query 33689 ACCCGCATGCGTTCCCCTCGCGCATGACGGT 33719 ||||||| | ||||| ||||||||||| || Sbjct 3046 ACCCGCACGGCTTCCCGTCGCGCATGACCGT 3016 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356216003507359