Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001264865.1_202015-08-11] 4,053 sequences; 15,232,490 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq3973 132 7e-26 seq2027 122 1e-22 >seq3973 Length=3410 Score = 132 bits (146), Expect = 7e-26 Identities = 393/600 (66%), Gaps = 12/600 (2%) Strand=Plus/Plus Query 49950 AAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGA 50009 ||||| || || || || ||| ||||||||||||||| | || || ||||| || Sbjct 60 AAACAGCAGGCACGCAAAGTCGGTGTGCAGACCCTCGTCACGCGAGATGAGCTCGTTCGA 119 Query 50010 AAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCC 50069 |||| || |||||||| || || ||||| || ||||| || || || ||||| || || Sbjct 120 GAACGACAGGCCGGGCATCAGACCGCGCTTCTTCAGCCAGAAGATCGAGGCAAACGAGCC 179 Query 50070 AGAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAAC-TGGC-- 50126 || |||||||| || || || |||||||| || ||||| | ||| | | ||| || Sbjct 180 CGAGAAGAAGATGCCCTCCACGGCGGCAAACGCCACAAGGCGCTC-CGAGAACGACGCAC 238 Query 50127 -GCTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTT 50185 || ||| ||||| | ||||| |||||||||| || || || ||||| | Sbjct 239 GGCGGTCGCTGATCCAGCGCAGCGCCCACTCGGCCTTCTGCTTCACCACCGGGATCGTCT 298 Query 50186 CTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAA 50245 | || ||||| || | | ||| | | || | || || || || | | Sbjct 299 CGATCGCATTGAACAAAAAGTCGCGCTGCTCCGGCTCGCGGATGTACGTGTCAATGAGCA 358 Query 50246 GACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAG 50305 | || | ||||| || ||||| ||||| ||||| || |||||||| || | | Sbjct 359 GCGAGTAGGTCTCCGAGTGGATGTTCTCAATCATGATCTGGAAACCGTAGAAGCAGCGCG 418 Query 50306 CCTCGGTAATCTGCACTTCTGTACAAAATCGTTCAGCTAAA--TTTTCATTCACTATTCC 50363 |||||| |||||| || | | ||| ||||| | ||| || || || || || || Sbjct 419 CCTCGGCGGCCTGCACCTCGGAGCTAAAGCGTTC--CAAAAGGTTCTCGTTGACAATCCC 476 Query 50364 GTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTTA- 50422 ||| || ||||| ||||| | || || | ||||| || |||||| | | Sbjct 477 GTCCGACGCCGCAAAGAACGCAAGGACGTGGCTGATAAAGTGGCGCTCGTTGTCGTTCAG 536 Query 50423 --GTTTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGA 50480 | || | ||| || | | || || || | || | || || | ||||| || || Sbjct 537 GCGGTTGTCCCAGTCGTGCAGGTCCTTGGACAGGTCGATCTCCTCGGCGGTCCAGAACGA 596 Query 50481 TGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAA 50540 ||||| ||||| || ||||| | ||| || || || || |||| ||||| | ||||| Sbjct 597 CGCCTCGGCCTTCTTGTACATCTGCCAAATCTCGTGGTAGCGGATGGGGAACAGGACAAA 656 >seq2027 Length=1134 Score = 122 bits (134), Expect = 1e-22 Identities = 391/602 (65%), Gaps = 16/602 (3%) Strand=Plus/Plus Query 49950 AAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGA 50009 ||||| || || || || ||| ||||||||||||||| | || || ||||| || Sbjct 41 AAACAGCAGGCAGGCAAAGTCGGTGTGCAGACCCTCGTCACGCGAGATGAGCTCGTTCGA 100 Query 50010 AAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCC 50069 |||| || |||||||| || || ||||| || ||||| || || ||||| || ||||| Sbjct 101 GAACGACAGGCCGGGCATCAGACCGCGCTTCTTGAGCCAGAAGATCGACGCGAACGACCC 160 Query 50070 AGAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAAC-TGGC-- 50126 || |||||||| || || || |||||||| || ||||| | ||| | | ||| || Sbjct 161 CGAGAAGAAGATGCCCTCGACGGCGGCAAACGCCACAAGGCGCTC-CGAGAACGACGCAC 219 Query 50127 -GCTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTT 50185 || ||| ||||| | ||||| |||||||| | || || || ||||| | Sbjct 220 GGCGGTCGCTGATCCAGCGCAGCGCCCACTCGGCCTTTTGCTTCACCACCGGGATCGTCT 279 Query 50186 CTATGGCATTAAAGAGATAGtttttttCATTACT----ATCTTTAACATAAGTATCGATC 50241 | || ||||| || || | || | | || || || || || || || Sbjct 280 CGATCGCATTGAACAGGAA----TTCACGCTGCTCCGGCTCGCGAATGTACGTGTCAATG 335 Query 50242 AAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACAT 50301 | || || | ||||| || ||||| ||||| ||||| || ||||| || || Sbjct 336 AGCAGCGAGTAGGTCTCCGAGTGGATGTTCTCAATCATGATCTGGAAACCGTAAAAGCAG 395 Query 50302 CTAGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATT 50361 | ||||||| |||||| || | | || || || | || || || || || Sbjct 396 CGCGCCTCGGCGGCCTGCACCTCCGAGCTGAAGCGCTCCAAGAGGTTCTCGTTGACAATC 455 Query 50362 CCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTT 50421 ||||| || ||||| ||||| | || || | ||||| || |||||| | Sbjct 456 CCGTCCGACGCGGCAAAGAACGCAAGGACGTGGCTGATAAAGTGGCGCTCGTTGTCGTTC 515 Query 50422 A---GTTTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAAT 50478 | | || | ||| || | | || || || | || | || || | ||||| || Sbjct 516 AGGCGGTTGTCCCAGTCGTGCAGGTCCTTGGACAGGTCAATCTCCTCGGCGGTCCAGAAC 575 Query 50479 GATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACA 50538 || ||||| ||||| || ||||| | |||||| || || || |||| ||||| | ||| Sbjct 576 GACGCCTCGGCCTTCTTGTACATTTGCCAGATTTCGTGGTAGCGGATGGGGAACAGGACA 635 Query 50539 AA 50540 || Sbjct 636 AA 637 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718232410706920