Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001264865.1_202015-08-11] 4,053 sequences; 15,232,490 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq1887 114 3e-20 seq1831 98.7 2e-15 >seq1887 Length=20729 Score = 114 bits (126), Expect = 3e-20 Identities = 153/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 ||| || || || | || || || ||||| || || ||||| ||||| | |||||| Sbjct 2293 AAGGACGAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGAGTACGACCGTC 2234 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 ||| ||||| || || || || || || | ||| || || || || || || || || || Sbjct 2233 TTCCAGTTGCTTACCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATACCCTCCTTGTC 2174 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526 ||||||||| || || |||||||| | |||||| | ||| || || || || || || Sbjct 2173 CTGAATCTTGGCCTTCACATTTTCAATCGTATCGGACGATTCCACTTCCAGCGTGATCGT 2114 Query 104527 CTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||| ||||| || || || || || | |||||| Sbjct 2113 CTTGCCAGTGAGCGTCTTGACGAACACCTGCAT 2081 Score = 107 bits (118), Expect = 4e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || ||||| || || ||||| ||||| | ||||||||| ||||| || || Sbjct 2733 GTCGACTCCTTCTGGATGTTGTAGTCGCTCAGAGTACGACCGTCTTCCAGTTGCTTACCG 2674 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 || || || || | ||| || || || || || || || || ||||||||||| || || Sbjct 2673 GCGAAGATCAGGCGCTGCTGGTCCGGGGGAATACCCTCCTTGTCCTGAATCTTGGCCTTG 2614 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 || || || | || ||| | ||| || || || || || ||||||||||| ||||| Sbjct 2613 ACGTTCTCGATAGTGTCGGACGATTCCACTTCCAGCGTGATCGTCTTACCAGTGAGTGTC 2554 Query 104543 TTTACAAATATCTGCAT 104559 || || || | |||||| Sbjct 2553 TTGACGAACACCTGCAT 2537 Score = 95.1 bits (104), Expect = 3e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || ||||| ||||| || || ||||| || || | || || || || || || || Sbjct 2505 GTCGATTCCTTCTGGATGTTGTAGTCGCTAAGCGTACGGCCATCCTCAAGCTGCTTGCCG 2446 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || || | |||||| || || || || || || || ||||||||||| || || Sbjct 2445 GCAAAGATCAGGCGCTGTTGGTCCGGGGGAATACCCTCCTTGTCCTGAATCTTGGCCTTG 2386 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 || || || | || ||| | || ||||| || ||||| ||||| || ||||| || Sbjct 2385 ACGTTCTCGATCGTGTCGGACGACTCGACCTCGAGCGTAATGGTCTTGCCCGTAAGAGTC 2326 Query 104543 TTTACAAATATCTGCAT 104559 || || || | |||||| Sbjct 2325 TTGACGAACACCTGCAT 2309 >seq1831 Length=21170 Score = 98.7 bits (108), Expect = 2e-15 Identities = 142/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || |||||||| || |||||| || || | || || || || || || ||| Sbjct 425 GTCGACTCCTTCTGAATGTTGTAGTCACTGAGCGTGCGGCCATCCTCAAGCTGCTTGCCA 366 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || || | |||||| || ||||| || || || || ||||||||||| || || Sbjct 365 GCAAAGATCAGACGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGAATCTTCGCCTTG 306 Query 104483 ACATTTTCTACGGTATCGCTAGG-TTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541 || || || | || || | ||| || || || || ||||| ||||| || ||||| || Sbjct 305 ACGTTCTCGATCGTGTC-CGAGGACTCAACTTCGAGCGTAATCGTCTTGCCCGTAAGGGT 247 Query 104542 TTTTACAAATATCTGCAT 104559 || || || | ||||| Sbjct 246 CTTGACGAAGACTTGCAT 229 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151338608960524