Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001264865.1_202015-08-11] 4,053 sequences; 15,232,490 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq3973 109 7e-19 seq2027 102 1e-16 >seq3973 Length=3410 Score = 109 bits (120), Expect = 7e-19 Identities = 387/601 (64%), Gaps = 14/601 (2%) Strand=Plus/Plus Query 33294 AAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGA 33353 ||||| || || || || ||| ||||||||||||||| | || || ||||| || Sbjct 60 AAACAGCAGGCACGCAAAGTCGGTGTGCAGACCCTCGTCACGCGAGATGAGCTCGTTCGA 119 Query 33354 AAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCC 33413 |||| || |||||||| || || ||||| || ||||| || || || || || || || Sbjct 120 GAACGACAGGCCGGGCATCAGACCGCGCTTCTTCAGCCAGAAGATCGAGGCAAACGAGCC 179 Query 33414 AGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAAC------C 33467 || |||||||| || || || || ||||| || | ||| | ||| | | ||| | Sbjct 180 CGAGAAGAAGATGCCCTCCACGGCGGCAAACGCCACAAGGCGCTC-CGAGAACGACGCAC 238 Query 33468 GGCGCTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGT 33527 |||| ||| ||||| | ||||| |||||||||| || || || ||||| Sbjct 239 GGCG--GTCGCTGATCCAGCGCAGCGCCCACTCGGCCTTCTGCTTCACCACCGGGATCGT 296 Query 33528 TTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAA 33587 || || ||||| || | | ||| | | || | || || || || | Sbjct 297 CTCGATCGCATTGAACAAAAAGTCGCGCTGCTCCGGCTCGCGGATGTACGTGTCAATGAG 356 Query 33588 AAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCT 33647 || || | ||||| || ||||| ||||| ||||| || |||||||| || | Sbjct 357 CAGCGAGTAGGTCTCCGAGTGGATGTTCTCAATCATGATCTGGAAACCGTAGAAGCAGCG 416 Query 33648 AGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCC 33707 ||||||| ||| || || | | ||| |||||| | || || || || || || Sbjct 417 CGCCTCGGCGGCCTGCACCTCGGAGCTAAAGCGTTCCAAAAGGTTCTCGTTGACAATCCC 476 Query 33708 GTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTT-- 33765 ||| || ||||| ||||| | || || | ||||| | |||| || ||| Sbjct 477 GTCCGACGCCGCAAAGAACGCAAGGACGTGGCTGATAAAGTGGCGCTCGT-TGTCGTTCA 535 Query 33766 --AGTTTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATG 33823 | || | ||| || | | || || || | || | || || | ||||| || | Sbjct 536 GGCGGTTGTCCCAGTCGTGCAGGTCCTTGGACAGGTCGATCTCCTCGGCGGTCCAGAACG 595 Query 33824 ATGCCTCTGCCTTTTTATACATGTTCCAGATGTCATAATATTGGATTGGGAAAATAACAA 33883 | ||||| ||||| || ||||| | ||| || || | || |||| ||||| | |||| Sbjct 596 ACGCCTCGGCCTTCTTGTACATCTGCCAAATCTCGTGGTAGCGGATGGGGAACAGGACAA 655 Query 33884 A 33884 | Sbjct 656 A 656 >seq2027 Length=1134 Score = 102 bits (112), Expect = 1e-16 Identities = 388/605 (64%), Gaps = 22/605 (4%) Strand=Plus/Plus Query 33294 AAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGA 33353 ||||| || || || || ||| ||||||||||||||| | || || ||||| || Sbjct 41 AAACAGCAGGCAGGCAAAGTCGGTGTGCAGACCCTCGTCACGCGAGATGAGCTCGTTCGA 100 Query 33354 AAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCC 33413 |||| || |||||||| || || ||||| || ||||| || || || ||||| || || Sbjct 101 GAACGACAGGCCGGGCATCAGACCGCGCTTCTTGAGCCAGAAGATCGACGCGAACGACCC 160 Query 33414 AGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAAC------C 33467 || |||||||| || || || || ||||| || | ||| | ||| | | ||| | Sbjct 161 CGAGAAGAAGATGCCCTCGACGGCGGCAAACGCCACAAGGCGCTC-CGAGAACGACGCAC 219 Query 33468 GGCGCTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGT 33527 |||| ||| ||||| | ||||| |||||||| | || || || ||||| Sbjct 220 GGCG--GTCGCTGATCCAGCGCAGCGCCCACTCGGCCTTTTGCTTCACCACCGGGATCGT 277 Query 33528 TTCTATGGCATTAAAGAGATAGtttttttCATTACT----ATCTTTAACATAAGTATCGA 33583 || || ||||| || || | || | | || || || || || || | Sbjct 278 CTCGATCGCATTGAACAGGAA----TTCACGCTGCTCCGGCTCGCGAATGTACGTGTCAA 333 Query 33584 TCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAAC 33643 | | || || | ||||| || ||||| ||||| ||||| || ||||| || | Sbjct 334 TGAGCAGCGAGTAGGTCTCCGAGTGGATGTTCTCAATCATGATCTGGAAACCGTAAAAGC 393 Query 33644 ATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTA 33703 | | ||||||| ||| || || | | || || ||| | || || || || | Sbjct 394 AGCGCGCCTCGGCGGCCTGCACCTCCGAGCTGAAGCGCTCCAAGAGGTTCTCGTTGACAA 453 Query 33704 TTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTG 33763 | ||||| || ||||| ||||| | || || | ||||| | |||| || | Sbjct 454 TCCCGTCCGACGCGGCAAAGAACGCAAGGACGTGGCTGATAAAGTGGCGCTCGT-TGTCG 512 Query 33764 TT----AGTTTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAA 33819 || | || | ||| || | | || || || | || | || || | ||||| Sbjct 513 TTCAGGCGGTTGTCCCAGTCGTGCAGGTCCTTGGACAGGTCAATCTCCTCGGCGGTCCAG 572 Query 33820 AATGATGCCTCTGCCTTTTTATACATGTTCCAGATGTCATAATATTGGATTGGGAAAATA 33879 || || ||||| ||||| || ||||| | |||||| || | || |||| ||||| | Sbjct 573 AACGACGCCTCGGCCTTCTTGTACATTTGCCAGATTTCGTGGTAGCGGATGGGGAACAGG 632 Query 33880 ACAAA 33884 ||||| Sbjct 633 ACAAA 637 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622915639937480