Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001264865.1_202015-08-11] 4,053 sequences; 15,232,490 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq1321 120 3e-22 seq1887 82.4 7e-11 >seq1321 Length=24366 Score = 120 bits (132), Expect = 3e-22 Identities = 155/213 (73%), Gaps = 1/213 (0%) Strand=Plus/Minus Query 23982 CCAAACAAA-ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGT 24040 ||||||| | ||||| || || ||||| || | || ||||| |||| || ||||||| Sbjct 286 CCAAACACACATGCAGGTTTTCGTAAAGACTCTGACAGGAAAGACGATCACACTCGAAGT 227 Query 24041 CGAGGCCAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACC 24100 |||| | |||||| |||||| | ||||| |||||| ||||| || ||||| || Sbjct 226 CGAGTCGTCCGACACGATCGAGAACGTCAAGGCAAAGATCCAAGACAAGGAGGGCATTCC 167 Query 24101 TCCCGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAG 24160 ||| || |||||| | ||||| | | |||||||| ||||| |||| | | | | | || Sbjct 166 TCCGGACCAACAGCGTCTGATCTTTGCGGGCAAGCAGCTCGAGGATGGCCGTACCCTGAG 107 Query 24161 CGATTATAACATTCAAAAAGAATCTACAATTCA 24193 ||| || ||||| || || || || || |||| Sbjct 106 CGACTACAACATCCAGAAGGAGTCGACGCTTCA 74 >seq1887 Length=20729 Score = 82.4 bits (90), Expect = 7e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| ||||| || || || | || || || | || || |||| |||||| || Sbjct 1853 ATGCAGGTGTTCGTCAAGACTCTTACGGGCAAGACTATCACGCTCGAGGTCGAGTCCTCG 1912 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| |||||| | || || ||||| ||||| || ||||| || || || || Sbjct 1913 GACACGATCGAGAACGTGAAGGCTAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAG 1972 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| | ||||| | | |||||||||||| || |||| | | | | ||||| || || Sbjct 1973 CAGCGCCTGATCTTTGCCGGCAAGCAACTTGAGGATGGCCGTACGCTTAGCGACTACAAT 2032 Query 24171 ATTCAAAAAGAATCTACAATTCA 24193 || || || ||||| || |||| Sbjct 2033 ATCCAGAAGGAATCGACGCTTCA 2055 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429914762908215