Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001264865.1_202015-08-11] 4,053 sequences; 15,232,490 total letters Query= NC_008187.1 Length=191100 Score E Sequences producing significant alignments: (Bits) Value seq3900 105 8e-18 seq1470 104 3e-17 seq3278 93.3 5e-14 seq3347 91.5 2e-13 seq1075 91.5 2e-13 >seq3900 Length=3969 Score = 105 bits (116), Expect = 8e-18 Identities = 138/185 (75%), Gaps = 7/185 (4%) Strand=Plus/Plus Query 126208 TCCTTGCCTCCCTCCAACCGCGTGCCAAACTGACCGTCCGGCTCCAACAACTGCACATTG 126267 |||||||| ||| | |||||||| ||||| |||| ||| | || | || ||| Sbjct 1293 TCCTTGCCGCCCATGGAGCGCGTGCCGAACTGGCCGTTGGGCATGAGCATGTTGACGTTG 1352 Query 126268 TTGGCTCCCACA-AAGTCCTGCGCAAACTTGACAATGGTC-TCGCACAGGTTCTGCTCGC 126325 ||| ||||| || ||||||||||| | ||| |||||| || || ||| |||| |||| Sbjct 1353 TTG-CTCCCGCAGAAGTCCTGCGCGAGGCCGACGATGGTCATCACA-AGGCTCTGGTCGC 1410 Query 126326 CGTGCTTGTAGTCGGTCTGCTCGGCCACGTAGCCGCTCAGCTGCGCAACCTTGATAAACT 126385 |||| | |||| |||| |||||||| |||||||| ||||||| |||||||| || Sbjct 1411 CGTGGTGGTAGGCGGTGTGCTCGGCGACGTAGCCCTGCAGCTGCTGCACCTTGAT---CT 1467 Query 126386 CGGTC 126390 ||||| Sbjct 1468 CGGTC 1472 >seq1470 Length=1876 Score = 104 bits (114), Expect = 3e-17 Identities = 148/203 (73%), Gaps = 4/203 (2%) Strand=Plus/Minus Query 126180 GGTGTAAATGTAGCGGGGAGCTGCCGAATCCTTGCCTCCCTCCAACCGCGTGCCAAACTG 126239 |||| | ||||| || | | |||| |||||||| ||| | ||||| || ||||| Sbjct 354 GGTGAAGATGTAACGCGCACTGGCCGCGTCCTTGCCGCCCATGGAGCGCGTACCGAACTG 295 Query 126240 ACCGTCCGGCTCCAACAACTGCACATTGTTGGCTCCCACA-AAGTCCTGCGCAAACTTGA 126298 |||| ||| | || | || |||||| ||||| || ||||||||||||| || Sbjct 294 GCCGTTGGGCATGAGCATGTTGACGTTGTTG-CTCCCGCAGAAGTCCTGCGCAAGGCCGA 236 Query 126299 CAATGGTC-TCGCACAGGTTCTGCTCGCCGTGCTTGTAGTCGGTCTGCTCGGCCACGTAG 126357 | |||||| || | |||| |||| |||||||| | |||| |||| ||||| || |||||| Sbjct 235 CGATGGTCATCAC-CAGGCTCTGGTCGCCGTGGTGGTAGGCGGTGTGCTCCGCGACGTAG 177 Query 126358 CCGCTCAGCTGCGCAACCTTGAT 126380 || ||||||| |||||||| Sbjct 176 CCCTGCAGCTGCTGCACCTTGAT 154 >seq3278 Length=77981 Score = 93.3 bits (102), Expect = 5e-14 Identities = 130/180 (72%), Gaps = 2/180 (1%) Strand=Plus/Minus Query 15018 TCGTAAAGGTTGTCATTGGCCAGATGCGCACGCCCGAGATTGGCGACAAGTTTTGCTC-T 15076 |||| |||| |||| |||||| |||| |||||| | ||||||||||| | ||| Sbjct 3196 TCGTCAAGGCCCTCATCCGCCAGACGCGCCGTCCCGAGCTGGGCGACAAGTTCTCCTCGC 3137 Query 15077 GGTATGGCGCAAAAGGGCACGTGCGGCATGATTTTCCCCCAGGAAGACATGCCCTTTACC 15136 | | ||| ||||||||| ||| || |||| | | ||||| |||||||| || ||| Sbjct 3136 GCCACGGC-CAAAAGGGCGTGTGTGGGCTGATCGTGCAGCAGGAGGACATGCCGTTCACC 3078 Query 15137 GCGTCAGGCATGACGCCCGACATTATCATCAACCCCAACTGCATCCCGTCCCGCATGACC 15196 | ||||| || ||||| ||||| ||||| || || ||||||| ||||||||| Sbjct 3077 GACCAGGGCATCTGCCCGGACATCATCATGAACCCGCACGGCTTCCCGTCGCGCATGACC 3018 Score = 87.8 bits (96), Expect = 2e-12 Identities = 165/243 (68%), Gaps = 0/243 (0%) Strand=Plus/Minus Query 15407 GGACCGACGTACTATCACCGACTCAAACACATGGTAAAGGACAAGATGCACGCGCGATCG 15466 || |||| ||||| || |||||| |||||||| | ||||||||||||||| || || Sbjct 2822 GGCCCGATTTACTACCAGAAACTCAAGCACATGGTCATGGACAAGATGCACGCCCGCGCG 2763 Query 15467 CACGGACAGGTGACGACGCTCCATCGCCAGCCCAACTGCGGTCGATCGCAAGGCGGTGGC 15526 | || | | || |||| |||||||| | | || || |||| | ||||||| Sbjct 2762 CGGGGGCCGCGCGCGGTGCTCACGCGCCAGCCGACCGAGGGGCGCTCGCGCGACGGTGGC 2703 Query 15527 CTCCGCTTTGGAGAGATGGAAAAGGACTGCATTCTGGTGCACGGCGCCACCCAATTCCTC 15586 || || | || |||||||| |||||| | | | | |||||||||| || | ||| Sbjct 2702 CTGCGTCTCGGCGAGATGGAGCGCGACTGCCTGATCGGGTACGGCGCCACGCAGCTTCTC 2643 Query 15587 AACGAGCGCATGTTTCTCAACAGTGACCCGTTCCAGATTGACGTGTGCAAAGACTGCGGC 15646 ||||||| | | ||| | ||| |||| | | |||||||| | | |||||| Sbjct 2642 CTCGAGCGCCTCATGATCAGCTCGGACGCGTTTGTGGTGAACGTGTGCGAGCAGTGCGGC 2583 Query 15647 ATG 15649 || Sbjct 2582 CTG 2580 >seq3347 Length=11639 Score = 91.5 bits (100), Expect = 2e-13 Identities = 132/181 (73%), Gaps = 4/181 (2%) Strand=Plus/Plus Query 15018 TCGTAAAGGTTGTCATTGGCCAGATGCGCACGCCCG-AGATTGGCGACAAGTTTTGCTC- 15075 |||| |||| |||| |||||| |||| |||||| || | ||||||||||| | ||| Sbjct 11166 TCGTCAAGGCGCTCATCCGCCAGACGCGC-CGCCCGGAGCTGGGCGACAAGTTCTCCTCG 11224 Query 15076 TGGTATGGCGCAAAAGGGCACGTGCGGCATGATTTTCCCCCAGGAAGACATGCCCTTTAC 15135 | | ||| || |||||| |||||| |||| | | ||||| |||||||| || || Sbjct 11225 CGCCACGGC-CAGAAGGGCGTGTGCGGGCTGATCGTGCAGCAGGAGGACATGCCGTTCAC 11283 Query 15136 CGCGTCAGGCATGACGCCCGACATTATCATCAACCCCAACTGCATCCCGTCCCGCATGAC 15195 || ||||| || ||||| ||||| ||||| || || ||||||| |||||||| Sbjct 11284 CGACCAGGGCATCTGCCCGGACATCATCATGAACCCGCACGGCTTCCCGTCGCGCATGAC 11343 Query 15196 C 15196 | Sbjct 11344 C 11344 >seq1075 Length=103598 Score = 91.5 bits (100), Expect = 2e-13 Identities = 104/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 15059 GGCGACAAGTTTTGCTCTGGTATGGCGCAAAAGGGCACGTGCGGCATGATTTTCCCCCAG 15118 |||||||||||| || || | ||||||||| ||| |||||| | | || ||| Sbjct 61021 GGCGACAAGTTTGCGTCGCGTCACGGGCAAAAGGGTACGGTCGGCATCACCTACCGCCAA 61080 Query 15119 GAAGACATGCCCTTTACCGCGTCAGGCATGACGCCCGACATTATCATCAACCCCAACTGC 15178 || || ||||||| ||||| ||||| ||||||||||| ||||||||||| || | Sbjct 61081 GAGGATTTGCCCTTCACCGCCGAGGGCATCACGCCCGACATCATCATCAACCCGCACGCC 61140 Query 15179 ATCCCGTCCCGCATGACCAT 15198 |||||| || |||||||| Sbjct 61141 ATCCCGAGTCGTATGACCAT 61160 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 611361025352800