Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001264865.1_202015-08-11] 4,053 sequences; 15,232,490 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq1321 123 2e-23 seq1887 109 5e-19 seq1831 98.7 9e-16 seq1579 84.2 2e-11 >seq1321 Length=24366 Score = 123 bits (136), Expect = 2e-23 Identities = 149/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| | || ||||||||| |||| || || | |||||| ||||||| |||||||| Sbjct 276 ATGCAGGTTTTCGTAAAGACTCTGACAGGAAAGACGATCACACTCGAAGTCGAGTCGTCC 217 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| |||||| | ||| ||| ||| ||||| || || ||||| || |||||| Sbjct 216 GACACGATCGAGAACGTCAAGGCAAAGATCCAAGACAAGGAGGGCATTCCTCCGGACCAA 157 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| | || ||||| ||||| || | || |||| || || || |||| ||||| Sbjct 156 CAGCGTCTGATCTTTGCGGGCAAGCAGCTCGAGGATGGCCGTACCCTGAGCGACTACAAC 97 Query 25179 ATTCAAAAAGAATCCACGCTACA 25201 || || || || || ||||| || Sbjct 96 ATCCAGAAGGAGTCGACGCTTCA 74 >seq1887 Length=20729 Score = 109 bits (120), Expect = 5e-19 Identities = 146/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| | || || |||||| | || || || | ||||| |||| || ||||| || Sbjct 1853 ATGCAGGTGTTCGTCAAGACTCTTACGGGCAAGACTATCACGCTCGAGGTCGAGTCCTCG 1912 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| |||||| ||||| || ||| ||||| || || ||||| || ||||| Sbjct 1913 GACACGATCGAGAACGTGAAGGCTAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAG 1972 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| | || ||||||||||| ||| | || |||| || || | |||| |||||| Sbjct 1973 CAGCGCCTGATCTTTGCCGGCAAGCAACTTGAGGATGGCCGTACGCTTAGCGACTACAAT 2032 Query 25179 ATTCAAAAAGAATCCACGCTACA 25201 || || || ||||| ||||| || Sbjct 2033 ATCCAGAAGGAATCGACGCTTCA 2055 Score = 109 bits (120), Expect = 5e-19 Identities = 148/204 (73%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| | || || ||||| | || ||||| | ||||| | |||||||| ||||| Sbjct 2537 ATGCAGGTGTTCGTCAAGACACTCACTGGTAAGACGATCACGCTGGAAGTGGAATCGTCC 2596 Query 25059 GACACTATCGAGTCACTGAA-GCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 |||||||||||| | || || || | ||| ||||| || || ||||| || ||||| Sbjct 2597 GACACTATCGAGAACGTCAAGGCCAAGATTCA-GGACAAGGAGGGTATTCCCCCGGACCA 2655 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||||| | || || ||||| || ||| | ||||| | ||| ||| || |||| ||||| Sbjct 2656 GCAGCGCCTGATCTTCGCCGGTAAGCAACTGGAAGACGGTCGTACTCTGAGCGACTACAA 2715 Query 25178 TATTCAAAAAGAATCCACGCTACA 25201 || || || || || ||||| || Sbjct 2716 CATCCAGAAGGAGTCGACGCTTCA 2739 Score = 104 bits (114), Expect = 2e-17 Identities = 147/204 (72%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| | || || |||||| | || || || |||| || |||| || |||||||| Sbjct 2309 ATGCAGGTGTTCGTCAAGACTCTTACGGGCAAGACCATTACGCTCGAGGTCGAGTCGTCC 2368 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||| |||||| | ||| | || | ||| ||||| || || ||||| || ||||| Sbjct 2369 GACACGATCGAGAACGTCAAGGCCAAGATTCAG-GACAAGGAGGGTATTCCCCCGGACCA 2427 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 |||||| | || ||||||||||| || | || |||| || || | |||| ||||| Sbjct 2428 ACAGCGCCTGATCTTTGCCGGCAAGCAGCTTGAGGATGGCCGTACGCTTAGCGACTACAA 2487 Query 25178 TATTCAAAAAGAATCCACGCTACA 25201 || || || ||||| ||||| || Sbjct 2488 CATCCAGAAGGAATCGACGCTTCA 2511 >seq1831 Length=21170 Score = 98.7 bits (108), Expect = 9e-16 Identities = 151/213 (71%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||| | || || ||||| | || || || | || ||| | |||||||| |||||| Sbjct 1 ATGCAAGTCTTCGTCAAGACCCTTACGGGCAAGACGATTACATTGGAAGTGGAATCGTCT 60 Query 25059 GACACTATCGAGTCACTGAA-GCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||| || || |||| || || | ||| || || || || ||||| || ||||| Sbjct 61 GACACCATTGAAAACGTGAAGGCGAAGATTCA-AGATAAGGAGGGCATTCCTCCGGACCA 119 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 |||||| | || ||||| ||||| || | || |||| || || || |||| ||||| Sbjct 120 ACAGCGTCTGATCTTTGCGGGCAAGCAGCTCGAGGATGGCCGTACCCTGAGCGACTACAA 179 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || || || || || ||||| || || || || Sbjct 180 CATCCAGAAGGAGTCGACGCTTCACTTGGTCCT 212 Score = 95.1 bits (104), Expect = 1e-14 Identities = 145/204 (71%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||| | || || ||||| | || || || | || || ||||||| ||||| || Sbjct 229 ATGCAAGTCTTCGTCAAGACCCTTACGGGCAAGACGATTACGCTCGAAGTTGAGTCCTCG 288 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||| |||||| | ||| | || | ||| ||||| || || ||||| || ||||| Sbjct 289 GACACGATCGAGAACGTCAAGGCGAAGATTCAG-GACAAGGAGGGCATTCCTCCGGACCA 347 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 |||||| | || ||||| ||||| || | || |||| ||||| | | || ||||| Sbjct 348 ACAGCGTCTGATCTTTGCTGGCAAGCAGCTTGAGGATGGCCGCACGCTCAGTGACTACAA 407 Query 25178 TATTCAAAAAGAATCCACGCTACA 25201 ||||| || || || ||||| || Sbjct 408 CATTCAGAAGGAGTCGACGCTTCA 431 >seq1579 Length=1639 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/213 (69%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || | ||||| | || || || | ||||| |||| || |||||| Sbjct 1243 ATGCAAATCTTCATCAAGACGCTCACGGGCAAGACGATCACGCTCGAGGTCGAGTCGAGC 1302 Query 25059 GACACTATCGA-GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||| ||||| ||| | ||| || || ||||| || || || || || ||||| Sbjct 1303 GACACGATCGACGTCG-TCAAGTCCAAGGTCCAGGACAAGGAGGGCATCCCCCCGGACCA 1361 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 |||||| | || ||||| ||||| || | ||||| | ||||| | |||| ||||| Sbjct 1362 ACAGCGCCTGATCTTTGCGGGCAAGCAGCTCGAAGACGGCCGCACGCTCAGCGACTACAA 1421 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || || || || || ||||| || | ||||| Sbjct 1422 CATCCAGAAGGAGTCGACGCTCCACCTTGTGCT 1454 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433306595357195