Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001264865.1_202015-08-11] 4,053 sequences; 15,232,490 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq1321 107 2e-18 seq1831 98.7 8e-16 seq1887 93.3 4e-14 seq1326 93.3 4e-14 >seq1321 Length=24366 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| |||| || || ||| | || || || ||| |||| || ||||| || | || Sbjct 276 ATGCAGGTTTTCGTAAAGACTCTGACAGGAAAGACGATCACACTCGAAGTCGAGTCGTCC 217 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || | |||| ||| || |||||||||||||| ||||| || || ||| Sbjct 216 GACACGATCGAGAACGTCAAGGCAAAGATCCAAGACAAGGAGGGCATTCCTCCGGACCAA 157 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || ||||| ||||| ||| | |||||| ||| ||| | ||| |||||| Sbjct 156 CAGCGTCTGATCTTTGCGGGCAAGCAGCTCGAGGATGGCCGTACCCTGAGCGACTACAAC 97 Query 22399 ATTCAAAAAGAATCCAC 22415 || || || || || || Sbjct 96 ATCCAGAAGGAGTCGAC 80 >seq1831 Length=21170 Score = 98.7 bits (108), Expect = 8e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||| | || || || || | || || || ||| | || || ||||| || || | Sbjct 229 ATGCAAGTCTTCGTCAAGACCCTTACGGGCAAGACGATTACGCTCGAAGTTGAGTCCTCG 288 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || | |||| || ||||| ||||||||||| ||||| || || ||| Sbjct 289 GACACGATCGAGAACGTCAAGGCGAAGATTCAGGACAAGGAGGGCATTCCTCCGGACCAA 348 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || ||||| ||||| ||| | |||||| |||||| || || |||||| Sbjct 349 CAGCGTCTGATCTTTGCTGGCAAGCAGCTTGAGGATGGCCGCACGCTCAGTGACTACAAC 408 Query 22399 ATTCAAAAAGAATCCAC 22415 ||||| || || || || Sbjct 409 ATTCAGAAGGAGTCGAC 425 >seq1887 Length=20729 Score = 93.3 bits (102), Expect = 4e-14 Identities = 107/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || ||||| ||||||||||||||||| || || ||||| || || || ||||||||||| Sbjct 2393 AAGATTCAGGACAAGGAGGGTATTCCCCCGGACCAACAGCGCCTGATCTTTGCCGGCAAG 2452 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACAT 22422 ||| | |||||| ||| || | ||| |||||||| || || ||||| || | || Sbjct 2453 CAGCTTGAGGATGGCCGTACGCTTAGCGACTACAACATCCAGAAGGAATCGACGCTTCAC 2512 Query 22423 TTAGTTTTGCGATTGCGCGGAGGT 22446 | ||| | || | ||||| ||| Sbjct 2513 CTCGTTCTCCGCCTCCGCGGTGGT 2536 Score = 89.7 bits (98), Expect = 4e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| |||| ||||| || | || || || ||| | || || || || || | || Sbjct 1625 ATGCAGGTTTTCGTTAAGACCCTGACAGGAAAGACGATTACGCTCGAGGTCGAGTCGTCC 1684 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || | |||| || || || ||||||||||||||||| || || || Sbjct 1685 GACACGATCGAGAACGTCAAGGCCAAGATCCAGGACAAGGAGGGTATTCCCCCGGACCAG 1744 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || ||||| || || ||||| ||| | |||||| |||| || | ||| |||||| Sbjct 1745 CAGCGCCTTATCTTCGCTGGCAAGCAGCTTGAGGATGACCGTACGCTGAGCGACTACAAC 1804 Query 22399 ATTCAAAAAGAATCCAC 22415 || || || ||||| || Sbjct 1805 ATCCAGAAGGAATCGAC 1821 >seq1326 Length=2175 Score = 93.3 bits (102), Expect = 4e-14 Identities = 107/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || || || ||||||||||| ||||| |||||||| || || || || ||||||||||| Sbjct 189 AAGATCCAGGACAAGGAGGGCATTCCGCCCGATCAGCAGCGCCTCATCTTTGCCGGCAAG 248 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACAT 22422 ||| | ||||| ||||| | ||| |||||||| || || || || || | || Sbjct 249 CAGCTCGAGGACGGGCGCACGCTGAGCGACTACAACATCCAGAAGGAGTCTACGCTGCAC 308 Query 22423 TTAGTTTTGCGATTGCGCGGAGGT 22446 | |||||||| ||||||| ||| Sbjct 309 CTCGTTTTGCGCCTGCGCGGCGGT 332 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419707267141945