Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001264865.1_202015-08-11] 4,053 sequences; 15,232,490 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq1954 98.7 2e-15 seq3657 96.9 7e-15 >seq1954 Length=1226 Score = 98.7 bits (108), Expect = 2e-15 Identities = 129/179 (72%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 280179 GGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTGGCGAGACCCAGGCC 280238 || ||||| ||| |||||||||| || ||| |||| | | || || || || | Sbjct 671 GGCCCCAACGGTTCGGGTAAGTCGACGCTAGTCAAGCTGGTCGTCGGTGACACGGAGCCG 612 Query 280239 ACTGAGGGGTCCGTTTGGAAGCATCCCAACATGCGGATGGCTTACGTCGCTCAGCACGCT 280298 | ||||| | |||||||| |||||| || ||| | |||||||| |||||||| Sbjct 611 AACGAGGGTGAGCTGTGGAAGCACCCCAACCTGGTGATTGGCTACGTCGCCCAGCACGCC 552 Query 280299 TTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAATACATTCAGTGGCGCTA 280357 |||||||||||||| | |||||||||| ||| || | | ||||| | |||||||| Sbjct 551 TTCCACCACATCGACCAGCACCTGGACAAGACGCCGCTCGAGTACATGCTCTGGCGCTA 493 >seq3657 Length=5871 Score = 96.9 bits (106), Expect = 7e-15 Identities = 134/188 (71%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 280170 GGTGTCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTGGCGAG 280229 ||||||||||| || || ||||| || ||||| || || ||||| || || || |||||| Sbjct 3448 GGTGTCATTGGCCCGAACGGTGCCGGCAAGTCGACGCTGATCAAGGTGCTCACCGGCGAG 3507 Query 280230 ACCCAGGCCACTGAGGGGTCCGTTTGGAAGCATCCCAACATGCGGATGGCTTACGTCGCT 280289 | | | || ||||| || |||||| |||||| |||| | || | | || Sbjct 3508 ATCGTCCCGACCGAGGGCAAGGTCGAGAAGCACCCCAACCTGCGTGTCGCGCTCATGGCA 3567 Query 280290 CAGCACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAATACATTCAG 280349 |||||||| ||||||||| ||||| | ||||| || | ||| | ||| ||||| Sbjct 3568 CAGCACGCGTTCCACCACCTCGAGCAGCACCTCGAGAAGACCGCGTGCCAGTACATCACC 3627 Query 280350 TGGCGCTA 280357 |||||||| Sbjct 3628 TGGCGCTA 3635 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027783425398573