Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001264865.1_202015-08-11] 4,053 sequences; 15,232,490 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq1321 125 6e-24 seq1831 122 7e-23 seq1887 104 2e-17 >seq1321 Length=24366 Score = 125 bits (138), Expect = 6e-24 Identities = 147/199 (74%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 114185 CGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACC 114244 ||| || || || || |||||||| ||||||| ||||| ||| || || || || || Sbjct 79 CGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTACGGCCATCCTCGAGCTGCTTGCC 138 Query 114245 AGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTT 114304 || |||| |||||||||||||||||||||||||| || ||||| |||||| || Sbjct 139 CGCAAAGATCAGACGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCTTGGATCTTTGCCTT 198 Query 114305 TAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGT 114364 | | || | ||||||| || ||||| || | || | ||| || || |||||||| Sbjct 199 GACGTTCTCGATCGTGTCGGACGACTCGACTTCGAGTGTGATCGTCTTTCCTGTCAGAGT 258 Query 114365 TTTTACAAAAATCTGCATG 114383 ||||| |||| ||||||| Sbjct 259 CTTTACGAAAACCTGCATG 277 >seq1831 Length=21170 Score = 122 bits (134), Expect = 7e-23 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | | || || || | ||| || || || || |||||||| ||| Sbjct 230 ATACCACCACGAAGACGGAGGACCAAGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCG 171 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 |||| ||||| ||| || || || || || || |||| |||||||||||||||||| Sbjct 170 CTCAGGGTACGGCCATCCTCGAGCTGCTTGCCCGCAAAGATCAGACGCTGTTGGTCCGGA 111 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 |||||||| || || || |||||| || | | ||||| |||||| | ||||| Sbjct 110 GGAATGCCCTCCTTATCTTGAATCTTCGCCTTCACGTTTTCAATGGTGTCAGACGATTCC 51 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| || | ||| ||||| || || || || || || | ||||| Sbjct 50 ACTTCCAATGTAATCGTCTTGCCCGTAAGGGTCTTGACGAAGACTTGCAT 1 Score = 100 bits (110), Expect = 2e-16 Identities = 141/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 114185 CGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACC 114244 ||| || || || ||||||||||| || || | || || ||| ||||| || || || Sbjct 426 CGTCGACTCCTTCTGAATGTTGTAGTCACTGAGCGTGCGGCCATCCTCAAGCTGCTTGCC 367 Query 114245 AGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTT 114304 ||| |||| |||||||||||||||||||||||||| || ||||| |||||| || Sbjct 366 AGCAAAGATCAGACGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGAATCTTCGCCTT 307 Query 114305 TAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGT 114364 | | || | ||||| | ||| || || || | || | ||| ||||| || || || Sbjct 306 GACGTTCTCGATCGTGTCCGAGGACTCAACTTCGAGCGTAATCGTCTTGCCCGTAAGGGT 247 Query 114365 TTTTACAAAAATCTGCAT 114382 || || || | ||||| Sbjct 246 CTTGACGAAGACTTGCAT 229 >seq1887 Length=20729 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| || || || | | ||| | || | ||| ||||| || || |||||||| ||| Sbjct 2538 ATACCACCGCGGAGGCGGAGAACGAGGTGAAGCGTCGATTCCTTCTGGATGTTGTAGTCG 2479 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || | ||||| ||| ||||| || || || || |||| || |||||||||||||| Sbjct 2478 CTAAGCGTACGGCCATCCTCAAGCTGCTTGCCGGCAAAGATCAGGCGCTGTTGGTCCGGG 2419 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||| || || ||||| |||||| || | | || | ||||||| || ||| Sbjct 2418 GGAATACCCTCCTTGTCCTGAATCTTGGCCTTGACGTTCTCGATCGTGTCGGACGACTCG 2359 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | || | || ||||| || ||||| || || || | |||||| Sbjct 2358 ACCTCGAGCGTAATGGTCTTGCCCGTAAGAGTCTTGACGAACACCTGCAT 2309 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420113647067436