Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001264865.1_202015-08-11] 4,053 sequences; 15,232,490 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq1326 87.8 1e-12 seq1887 86.0 5e-12 seq1333 82.4 6e-11 >seq1326 Length=2175 Score = 87.8 bits (96), Expect = 1e-12 Identities = 103/137 (75%), Gaps = 2/137 (1%) Strand=Plus/Minus Query 33900 ACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGC 33959 ||| || | ||| |||| || || || ||||| ||||||||| |||||||| || || Sbjct 332 ACCGCCGCGCAGGCGCAAAACGAGGTGCAGCGTAGACTCCTTCTGGATGTTGTAGTC-GC 274 Query 33960 CAATTGT-CGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCG 34018 | || ||| |||| || | |||||||||||||| || |||||||||||||| || Sbjct 273 TCAGCGTGCGCCCGTCCTCGAGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGATCGGGCG 214 Query 34019 GCACGCTCTCTTTGTCC 34035 | | || ||| |||||| Sbjct 213 GAATGCCCTCCTTGTCC 197 >seq1887 Length=20729 Score = 86.0 bits (94), Expect = 5e-12 Identities = 160/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 33900 ACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGC 33959 ||| || | ||| || || || || |||||||| ||||||||| |||||||| || || Sbjct 2764 ACCACCACGCAGACGGAGGACGAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTC-GC 2706 Query 33960 CAATTGT-CGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCG 34018 | || || |||| |||| |||||| ||||| || |||||||||||||| ||| | Sbjct 2705 TCAGAGTACGACCGTCTTCCAGTTGCTTACCGGCGAAGATCAGGCGCTGCTGGTCCGGGG 2646 Query 34019 GCACGCTCTCTTTGTCCATAATTTTTTGCTTAATGGAACTC-ACACTATCAGTAGATTCG 34077 | | | ||| |||||| ||| || ||| | | ||| | | | || | ||||| Sbjct 2645 GAATACCCTCCTTGTCCTGAATCTTGGCCTTGA-CGTTCTCGATAGTGTCGGACGATTCC 2587 Query 34078 CATTCGACCGTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCAT 34127 ||| | ||| || || || || || ||||| || || || | ||||| Sbjct 2586 ACTTCCAGCGTGATCGTCTTACCAGTGAGTGTCTTGACGAACACCTGCAT 2537 Score = 84.2 bits (92), Expect = 2e-11 Identities = 107/145 (74%), Gaps = 2/145 (1%) Strand=Plus/Minus Query 33900 ACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGC 33959 ||| || | ||| || || || || |||||||| ||||||||| |||||||| || || Sbjct 2308 ACCACCACGCAGACGAAGGACGAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTC-GC 2250 Query 33960 CAATTGT-CGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCG 34018 | || || |||| |||| |||||| ||||| || |||||||||||||| ||| | Sbjct 2249 TCAGAGTACGACCGTCTTCCAGTTGCTTACCGGCGAAGATCAGGCGCTGCTGGTCCGGGG 2190 Query 34019 GCACGCTCTCTTTGTCCATAATTTT 34043 | | | ||| |||||| ||| || Sbjct 2189 GAATACCCTCCTTGTCCTGAATCTT 2165 >seq1333 Length=2152 Score = 82.4 bits (90), Expect = 6e-11 Identities = 102/137 (74%), Gaps = 2/137 (1%) Strand=Plus/Minus Query 33900 ACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGC 33959 ||| || | ||| ||||| || || || ||||| ||||||||| |||||||| || || Sbjct 336 ACCGCCGCGCAGGCGCAGGACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTC-GC 278 Query 33960 CAATTGT-CGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCG 34018 | || ||| |||| || | |||||||||||||| || || |||||||| ||| || Sbjct 277 TCAGCGTGCGCCCGTCCTCGAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGGTCCGGCG 218 Query 34019 GCACGCTCTCTTTGTCC 34035 | | || ||| || ||| Sbjct 217 GGATGCCCTCCTTATCC 201 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397042786730506