Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001264865.1_202015-08-11] 4,053 sequences; 15,232,490 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq1470 98.7 2e-15 seq3900 89.7 1e-12 seq2678 86.0 1e-11 >seq1470 Length=1876 Score = 98.7 bits (108), Expect = 2e-15 Identities = 236/343 (69%), Gaps = 12/343 (3%) Strand=Plus/Minus Query 297437 GTGAAAATATATCGTGCACTCGCGTGATCCTTACCACCCTGCAATCTCGAACCGAACTGG 297496 ||||| || || || ||||| || ||||| || ||| | | || |||||||||| Sbjct 353 GTGAAGATGTAACGCGCACTGGCCGCGTCCTTGCCGCCCATGGAGCGCGTACCGAACTGG 294 Query 297497 CCCTCCGGCAACAACCAGTTGATGTTATTGCTTCCGACATAA-TCCTGTGCAAGGTTCAC 297555 || | |||| | | ||||| ||| ||||| ||| || || ||||| |||||| || Sbjct 293 CCGTTGGGCATGAGCATGTTGACGTTGTTGCTCCCG-CAGAAGTCCTGCGCAAGGCCGAC 235 Query 297556 GATGGTCCCTTGCAGAGATGCT--TCGCCATGGTGATAGGCGCTATGCTCTGCAACGTAA 297613 ||||||| ||| | | || ||||| ||||| |||||| | ||||| || ||||| Sbjct 234 GATGGTCATCACCAG-GCT-CTGGTCGCCGTGGTGGTAGGCGGTGTGCTCCGCGACGTAG 177 Query 297614 CCGCTG-AACTG-TGCAACCTTCACGTCGGTCGTCAAATTGCGCTTGAAAGCTG-AATAT 297670 || ||| | ||| ||| ||||| | |||||| | | ||||||||| |||| | | | Sbjct 176 CC-CTGCAGCTGCTGC-ACCTTGATTTCGGTCTTGAGGTTGCGCTTG-AAGCAGCCAAAC 120 Query 297671 ATCACTTTCCGTTGAGAAGGTTTGAAACCATCAACGACCGACGGAATGCTTCGTTCCAGA 297730 | ||| || || || || || || || || || |||||||| ||| || Sbjct 119 AGCACCTTGCGCTGCCCGGGCTTCAAGCCGTCGACCACCGACGGGATGGAGCGGATGTTG 60 Query 297731 TCGTACCGCGAGAACAAAATAAGTTCCTTGTCGATGAAGTCGG 297773 ||| | |||||| | || || ||||||| ||| ||||||| Sbjct 59 TCGGCCATCGAGAAGAGGATCAGCTCCTTGTTGATAAAGTCGG 17 >seq3900 Length=3969 Score = 89.7 bits (98), Expect = 1e-12 Identities = 238/348 (68%), Gaps = 22/348 (6%) Strand=Plus/Plus Query 297437 GTGAAAATATATCGTGCACTCGCGTGATCCTTACCACCCTGCAATCTCGAACCGAACTGG 297496 ||||| || || || || || ||| ||||| || ||| | | || ||||||||| Sbjct 1266 GTGAAGATGTAACGCGCGCTGGCGGCGTCCTTGCCGCCCATGGAGCGCGTGCCGAACTGG 1325 Query 297497 CCCTCCGGCAACAACCAGTTGATGTTATTGCTTCCGACATAA-TCCTGTGCAAGGTTCAC 297555 || | |||| | | ||||| ||| ||||| ||| || || ||||| || ||| || Sbjct 1326 CCGTTGGGCATGAGCATGTTGACGTTGTTGCTCCCG-CAGAAGTCCTGCGCGAGGCCGAC 1384 Query 297556 GATGGTCCCTTGCAGAGATGCT--TCGCCATGGTGATAGGCGCTATGCTCTGCAACGTAA 297613 |||||| | | || || || ||||| ||||| |||||| | ||||| || ||||| Sbjct 1385 GATGGT-CATCACA-AGGCTCTGGTCGCCGTGGTGGTAGGCGGTGTGCTCGGCGACGTAG 1442 Query 297614 CCGCTG-AACTG-TGCAACCTTCACGTCGGTCGTCAAATTGCGCTTGAA--AGCTGAATA 297669 || ||| | ||| ||| ||||| | |||||| | | ||||||||||| ||| || | Sbjct 1443 CC-CTGCAGCTGCTGC-ACCTTGATCTCGGTCTTGAGGTTGCGCTTGAAGCAGCCGA--A 1498 Query 297670 TATCACTTTCCGTTGAGAAGGTTTGAAACCATCAACGACCGACGGAATGCTTCGTTCCAG 297729 | ||| || || || || || | || || || |||||||||||| || | Sbjct 1499 CAGCACCTTGCGCTGCCCGGGCTTCAGGCCGTCGACCACCGACGGAATGGAGCG---GAT 1555 Query 297730 ATCGTACCG----CGAGAACAAAATAAGTTCCTTGTCGATGAAGTCGG 297773 | || ||| |||||| | || || ||||||| ||| ||||||| Sbjct 1556 GTTGT-CCGCCATCGAGAAGAGGATGAGCTCCTTGTTGATAAAGTCGG 1602 >seq2678 Length=728 Score = 86.0 bits (94), Expect = 1e-11 Identities = 204/306 (67%), Gaps = 3/306 (1%) Strand=Plus/Plus Query 333725 CTTCACGAACTCGGACAGATTTCCCTTGTACTTCTTCAGCTTTAGGTTAGGTTCGTAATG 333784 |||||||||| | ||| || ||| ||| ||| | ||| | | ||||| | || Sbjct 387 CTTCACGAACGCATCCAGGTTGCCCGGGTAACGCTTGATCTTGAAGC--GGTTCA-AGTG 443 Query 333785 GATAATAGAGGTGCAAACAGCGTCGAGGAACCCGGAGTCGTGTGACACAATCACGCACGA 333844 || ||| ||| || || ||| ||||||| ||||||||| || ||||| | ||| Sbjct 444 GAGAATGTCGGTACACACGTCGTTGAGGAACTTGGAGTCGTGCGAGACAATGATCGACGT 503 Query 333845 AACGTCCTTAAGGTTGATCAGGTATTCAATCAGCCACCTCACGTTAGACACAGAAAGATG 333904 || | || || | ||||| || | | |||| | ||||| |||| | || Sbjct 504 GGTCTCGGTGAGACTGTTGAGGTAGTCCGTGATCCACTTGACGTTGATCACATCCAAGTG 563 Query 333905 GTTGGTCGGCTCGTCAAGAAGTAGTAGCTTTGCGTTCAGGAGCATTGCACGTGCAAGAGC 333964 ||| |||||||||||||| || || | | || || | |||| ||||| || || || Sbjct 564 GTTCGTCGGCTCGTCAAGCAGAAGAATGTCGGCCTTGAACAGCACCGCACGCGCCAGGGC 623 Query 333965 GAGTTTCATTTTCCACCCTCCTGAAAGAGTGTTAATTGGGGCAGATTGGCGCTCAATATC 334024 ||| ||||| ||||| || || || || | |||| || ||| ||||||| ||| Sbjct 624 GAGCTTCATCTTCCAGCCACCCGAGAGCGCCGTAATGGGACCAGCCTGGCGCTGCTCATC 683 Query 334025 AAAGCC 334030 ||||| Sbjct 684 GAAGCC 689 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102822728475550