Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001264865.1_202015-08-11] 4,053 sequences; 15,232,490 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq1321 116 3e-21 seq1887 98.7 9e-16 seq3913 93.3 4e-14 seq1459 93.3 4e-14 seq1831 91.5 1e-13 >seq1321 Length=24366 Score = 116 bits (128), Expect = 3e-21 Identities = 166/231 (72%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || |||||||| | | || || || ||||| || ||||| ||||| || || ||| Sbjct 47 ATACCACCGCGGAGGCGGAGGACGAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCG 106 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 || | ||| ||| || | || || || || | |||| || || |||||||| Sbjct 107 CTCAGGGTACGGCCATCCTCGAGCTGCTTGCCCGCAAAGATCAGACGCTGTTGGTCCGGA 166 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289 |||||||| || || ||||| || ||| |||| || | || | |||||||| ||||| Sbjct 167 GGAATGCCCTCCTTGTCTTGGATCTTTGCCTTGA-CGTTCTCGATCGTGTCGGACGACTC 225 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||||||| || | ||| || || || ||||| ||||| |||| ||||| Sbjct 226 GACTTCGAGTGTGATCGTCTTTCCTGTCAGAGTCTTTACGAAAACCTGCAT 276 >seq1887 Length=20729 Score = 98.7 bits (108), Expect = 9e-16 Identities = 162/231 (70%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || |||||||| | | || || || ||||| |||||||| |||||||| || ||| Sbjct 2082 ATACCACCGCGGAGGCGGAGAACGAGGTGAAGCGTCGATTCCTTCTGGATATTGTAGTCG 2023 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 || | || ||| || | ||| || || || | |||| || ||||||||||| Sbjct 2022 CTAAGCGTACGGCCATCCTCAAGTTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCCGGG 1963 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289 |||||||| || || || || || || || | || | || | ||||| || ||||| Sbjct 1962 GGAATGCCCTCCTTGTCCTGGATCTTAGCCTTCA-CGTTCTCGATCGTGTCCGAGGACTC 1904 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||| ||||| || | || ||||| || ||||| || || || | ||||| Sbjct 1903 GACCTCGAGCGTGATAGTCTTGCCCGTAAGAGTCTTGACGAACACCTGCAT 1853 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 45132 ACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCC 45191 || || || || || |||||||| ||||| || || ||||| | || ||| || Sbjct 1833 ACAAGGTGAAGTGTCGATTCCTTCTGGATGTTGTAGTCGCTCAGCGTACGGTCATCCTCA 1774 Query 45192 AATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGA 45251 | || || || ||| | || | || ||||||||||| ||||| || || || || || Sbjct 1773 AGCTGCTTGCCAGCGAAGATAAGGCGCTGCTGGTCCGGGGGAATACCCTCCTTGTCCTGG 1714 Query 45252 ATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTT 45310 || || |||| || | || | |||||||| |||||||| ||||| |||| ||| || Sbjct 1713 ATCTTGGCCTTGA-CGTTCTCGATCGTGTCGGACGACTCGACCTCGAGCGTAATCGTCTT 1655 Query 45311 GCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || || || || || |||| ||||| Sbjct 1654 TCCTGTCAGGGTCTTAACGAAAACCTGCAT 1625 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 45132 ACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCC 45191 || || || ||||| || ||||| ||||| || || ||||| | || | || ||| Sbjct 2745 ACGAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGAGTACGACCGTCTTCC 2686 Query 45192 AATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGA 45251 | ||| || || ||| | |||| || ||||||||||| ||||| || || || || ||| Sbjct 2685 AGTTGCTTACCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATACCCTCCTTGTCCTGA 2626 Query 45252 ATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTT 45310 || || |||| || | || | |||||||| || || ||||| || || | ||| || Sbjct 2625 ATCTTGGCCTTGA-CGTTCTCGATAGTGTCGGACGATTCCACTTCCAGCGTGATCGTCTT 2567 Query 45311 GCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || || || || || || | ||||| Sbjct 2566 ACCAGTGAGTGTCTTGACGAACACCTGCAT 2537 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 45132 ACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCC 45191 || || || ||||| || ||||| ||||| || || ||||| | || | || ||| Sbjct 2289 ACGAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGAGTACGACCGTCTTCC 2230 Query 45192 AATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGA 45251 | ||| || || ||| | |||| || ||||||||||| ||||| || || || || ||| Sbjct 2229 AGTTGCTTACCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATACCCTCCTTGTCCTGA 2170 Query 45252 ATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTG 45311 || || || | ||| | || ||||| || || ||||| || || | ||| ||| Sbjct 2169 ATCTTGGCCTTCACATTTTCAATCGTATCGGACGATTCCACTTCCAGCGTGATCGTCTTG 2110 Query 45312 CCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || || || || || || | ||||| Sbjct 2109 CCAGTGAGCGTCTTGACGAACACCTGCAT 2081 >seq3913 Length=3884 Score = 93.3 bits (102), Expect = 4e-14 Identities = 201/297 (68%), Gaps = 9/297 (3%) Strand=Plus/Plus Query 123255 AACGCCGTGCGGCACGTCGACCAGGGCGGCAAA---CGCAAAGGCGCGATGGCGATCTAT 123311 ||| | | ||| ||||||||||||| ||||| ||| || ||| | || ||||| Sbjct 1 AACACGGCGCGCTACGTCGACCAGGGTGGCAACAAGCGCCCTGGTGCGTTTGCCATCTAC 60 Query 123312 CTAGAACCGTGGCACGTTGATGTGTACGATTTTTTAAATTTAAAACGCAACATGGG-GGC 123370 || || ||||||||| || |||| || ||| | | | ||||| | ||| Sbjct 61 CTCGAGCCGTGGCACTCGGACGTGTTTGAGTTTATCGACCTG---CGCAAGAACCACGGC 117 Query 123371 --GGAAGAAAAGAAAGCCCGCGATTTGTTGTACGCTTTATGGGTACCCGATTTGTTTATG 123428 |||||| | || ||||| |||| ||||| | ||||| ||||| |||||||| Sbjct 118 AAGGAAGAGGTGCGCGCGCGCGACCTGTTTTACGCGCTGTGGGTGCCCGACCTGTTTATG 177 Query 123429 CGACGCGTAAAAGACGACGGCGTGTGGTCGCTCATGTGTCCCGATCGGTGTCCCGGCTTG 123488 || || || | | | ||||| ||| |||| ||||| |||| | |||||| || Sbjct 178 CGCCGTGTCGAGCAGGGCGGCGACTGGACGCTGATGTGCCCCGCCGAGGCGCCCGGCCTG 237 Query 123489 AGCGACGTTTACGGCAATCAGTTTGACGAGTTGTACGCGCAATACGAGCGCGAAGGC 123545 |||| || ||| | ||||||||| | |||||| || ||||||||||| ||| Sbjct 238 GCCGACTGCTATGGCGAAGAGTTTGACGCGCTGTACGAGCGCTACGAGCGCGAGGGC 294 >seq1459 Length=1921 Score = 93.3 bits (102), Expect = 4e-14 Identities = 201/297 (68%), Gaps = 9/297 (3%) Strand=Plus/Minus Query 123255 AACGCCGTGCGGCACGTCGACCAGGGCGGCAAA---CGCAAAGGCGCGATGGCGATCTAT 123311 ||| | | ||| ||||||||||||| ||||| ||| ||||| | || ||||| Sbjct 1921 AACACGGCGCGCTACGTCGACCAGGGTGGCAACAAGCGCCCCGGCGCCTTTGCCATCTAC 1862 Query 123312 CTAGAACCGTGGCACGTTGATGTGTACGATTTTTTAAATTTAAAACGCAACATGGG-GGC 123370 || || ||||||||| || |||| || ||| | | | ||||| | ||| Sbjct 1861 CTCGAGCCGTGGCACTCGGACGTGTTTGAGTTTATCGACCTG---CGCAAGAACCACGGC 1805 Query 123371 --GGAAGAAAAGAAAGCCCGCGATTTGTTGTACGCTTTATGGGTACCCGATTTGTTTATG 123428 |||||| | || ||||| |||| ||||| | ||||| || || |||||||| Sbjct 1804 AAGGAAGAGGTGCGCGCGCGCGACCTGTTCTACGCGCTGTGGGTGCCGGACCTGTTTATG 1745 Query 123429 CGACGCGTAAAAGACGACGGCGTGTGGTCGCTCATGTGTCCCGATCGGTGTCCCGGCTTG 123488 || || || | | | ||||| ||| |||| ||||| |||| | |||||| | Sbjct 1744 CGCCGTGTCGAGCAGGGCGGCGACTGGACGCTGATGTGCCCCGCCGAGGCGCCCGGCCTC 1685 Query 123489 AGCGACGTTTACGGCAATCAGTTTGACGAGTTGTACGCGCAATACGAGCGCGAAGGC 123545 |||| |||||| | ||||||||||| |||||| || ||||||||||| ||| Sbjct 1684 GCCGACTGCTACGGCGAGGAGTTTGACGAGCTGTACGAGCGCTACGAGCGCGAGGGC 1628 >seq1831 Length=21170 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGT 45197 || ||||| || ||||| ||||| || || ||||| | ||| ||| || | || Sbjct 203 TGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTACGGCCATCCTCGAGCTGC 144 Query 45198 TTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTT 45257 || || || | |||| || || |||||||| |||||||| || ||||||||||| || Sbjct 143 TTGCCCGCAAAGATCAGACGCTGTTGGTCCGGAGGAATGCCCTCCTTATCTTGAATCTTC 84 Query 45258 TGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTT 45317 || | ||| | |||||| || || || ||||| | |||| ||| ||||| || Sbjct 83 GCCTTCACGTTTTCAATGGTGTCAGACGATTCCACTTCCAATGTAATCGTCTTGCCCGTA 24 Query 45318 AGAGTTTTTACAAAAATTTGCAT 45340 || || || || || | |||||| Sbjct 23 AGGGTCTTGACGAAGACTTGCAT 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451980300387880