Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001264865.1_202015-08-11] 4,053 sequences; 15,232,490 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq1887 154 3e-32 seq1831 141 2e-28 seq1321 127 5e-24 seq1579 116 9e-21 seq1186 116 9e-21 seq1333 104 6e-17 >seq1887 Length=20729 Score = 154 bits (170), Expect = 3e-32 Identities = 156/203 (77%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| ||||| || ||||||||||| |||| ||||||||| || ||| | || ||| Sbjct 2748 AGGACGAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGAGTACGACCGTCT 2689 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 ||||| ||||| ||||||||||| || |||||||||||||| ||| || || ||| Sbjct 2688 TCCAGTTGCTTACCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATACCCTCCTTGTCC 2629 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 |||||||| ||| ||| |||| ||||| | | ||| || |||| |||||||||| Sbjct 2628 TGAATCTTGGCCTTGACGTTCTCGATAGTGTCGGACGATTCCACTTCCAGCGTGATCGTC 2569 Query 199598 TTACCCGTGAGAGTTTTCACAAA 199620 ||||| ||||| || || || || Sbjct 2568 TTACCAGTGAGTGTCTTGACGAA 2546 Score = 145 bits (160), Expect = 2e-29 Identities = 154/203 (76%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| ||||| || ||||||||||| |||| ||||||||| || ||| | || ||| Sbjct 2292 AGGACGAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGAGTACGACCGTCT 2233 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 ||||| ||||| ||||||||||| || |||||||||||||| ||| || || ||| Sbjct 2232 TCCAGTTGCTTACCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATACCCTCCTTGTCC 2173 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 |||||||| |||||| ||| | || || | | ||| || |||| |||||||||| Sbjct 2172 TGAATCTTGGCCTTCACATTTTCAATCGTATCGGACGATTCCACTTCCAGCGTGATCGTC 2113 Query 199598 TTACCCGTGAGAGTTTTCACAAA 199620 || || ||||| || || || || Sbjct 2112 TTGCCAGTGAGCGTCTTGACGAA 2090 Score = 118 bits (130), Expect = 2e-21 Identities = 149/205 (73%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||||||||| || ||||| ||||| |||| ||||||||| || || | |||| Sbjct 1836 AGGACAAGGTGAAGTGTCGATTCCTTCTGGATGTTGTAGTCGCTCAGCGTACGGTCATCC 1777 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| || |||||||| || |||||||||||||| ||| || || ||| Sbjct 1776 TCAAGCTGCTTGCCAGCGAAGATAAGGCGCTGCTGGTCCGGGGGAATACCCTCCTTGTCC 1717 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| ||| |||| ||||| | | || || || | ||| |||||| Sbjct 1716 TGGATCTTGGCCTTGACGTTCTCGATCGTGTCGGACGACTCGACCTCGAGCGTAATCGTC 1657 Query 199598 TTACCCGTGAGAGTTTTCACAAAAA 199622 || || || || || || || |||| Sbjct 1656 TTTCCTGTCAGGGTCTTAACGAAAA 1632 Score = 113 bits (124), Expect = 1e-19 Identities = 149/204 (73%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAA-GTCCTTCCATC 199476 || || ||||| || ||||| ||||| |||| |||||||| || || || | ||||| Sbjct 2064 AGAACGAGGTGAAGCGTCGATTCCTTCTGGATATTGTAGTC-GCTAAGCGTACGGCCATC 2006 Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536 || || ||||| ||||| ||||| || |||||||||||||| ||| || || || Sbjct 2005 CTCAAGTTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTC 1946 Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596 ||| ||||| ||||||| |||| ||||| | | || || || | |||||| || Sbjct 1945 CTGGATCTTAGCCTTCACGTTCTCGATCGTGTCCGAGGACTCGACCTCGAGCGTGATAGT 1886 Query 199597 CTTACCCGTGAGAGTTTTCACAAA 199620 ||| ||||| ||||| || || || Sbjct 1885 CTTGCCCGTAAGAGTCTTGACGAA 1862 Score = 113 bits (124), Expect = 1e-19 Identities = 149/204 (73%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAA-GTCCTTCCATC 199476 || || ||||| || ||||| ||||| |||| ||||||||| || || || | ||||| Sbjct 2520 AGAACGAGGTGAAGCGTCGATTCCTTCTGGATGTTGTAGTC-GCTAAGCGTACGGCCATC 2462 Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536 || |||||||| ||||| ||||| || ||||| |||||||| ||| || || || Sbjct 2461 CTCAAGCTGCTTGCCGGCAAAGATCAGGCGCTGTTGGTCCGGGGGAATACCCTCCTTGTC 2402 Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596 ||||||||| ||| ||| |||| ||||| | | || || || | ||| || || Sbjct 2401 CTGAATCTTGGCCTTGACGTTCTCGATCGTGTCGGACGACTCGACCTCGAGCGTAATGGT 2342 Query 199597 CTTACCCGTGAGAGTTTTCACAAA 199620 ||| ||||| ||||| || || || Sbjct 2341 CTTGCCCGTAAGAGTCTTGACGAA 2318 >seq1831 Length=21170 Score = 141 bits (156), Expect = 2e-28 Identities = 162/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | ||||| | ||| || ||||||||||| |||| ||||||||| || || Sbjct 221 CGAAGACGGAGGACCAAGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTA 162 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||| || |||||||| || || ||||| |||||||| ||||||||| ||| || Sbjct 161 CGGCCATCCTCGAGCTGCTTGCCCGCAAAGATCAGACGCTGTTGGTCCGGAGGAATGCCC 102 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || || |||||||| ||||||| ||| | |||||| | | ||| || ||||| Sbjct 101 TCCTTATCTTGAATCTTCGCCTTCACGTTTTCAATGGTGTCAGACGATTCCACTTCCAAT 42 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || |||||||| ||||| || || || || || | ||| Sbjct 41 GTAATCGTCTTGCCCGTAAGGGTCTTGACGAAGACTTG 4 Score = 125 bits (138), Expect = 2e-23 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| ||||| || ||||||||||| || | |||||||||| | || | ||||| Sbjct 440 AGGACGAGGTGAAGCGTCGACTCCTTCTGAATGTTGTAGTCACTGAGCGTGCGGCCATCC 381 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| || || ||||| |||||||| ||||||||| ||| || || ||| Sbjct 380 TCAAGCTGCTTGCCAGCAAAGATCAGACGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCC 321 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 |||||||| ||| ||| |||| ||||| | | || || || | ||| |||||| Sbjct 320 TGAATCTTCGCCTTGACGTTCTCGATCGTGTCCGAGGACTCAACTTCGAGCGTAATCGTC 261 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || ||||| || || || || || | ||| Sbjct 260 TTGCCCGTAAGGGTCTTGACGAAGACTTG 232 >seq1321 Length=24366 Score = 127 bits (140), Expect = 5e-24 Identities = 151/205 (74%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| ||||| || ||||||||||| |||| ||||||||| || || | ||||| Sbjct 65 AGGACGAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTACGGCCATCC 124 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| || || ||||| |||||||| ||||||||| ||| || || || Sbjct 125 TCGAGCTGCTTGCCCGCAAAGATCAGACGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCT 184 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || |||||| ||| ||| |||| ||||| | | || || || | ||||||||| Sbjct 185 TGGATCTTTGCCTTGACGTTCTCGATCGTGTCGGACGACTCGACTTCGAGTGTGATCGTC 244 Query 199598 TTACCCGTGAGAGTTTTCACAAAAA 199622 || || || ||||| || || |||| Sbjct 245 TTTCCTGTCAGAGTCTTTACGAAAA 269 >seq1579 Length=1639 Score = 116 bits (128), Expect = 9e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || ||||||||||| ||||||||||| |||| ||||||||| | || | || ||| Sbjct 1454 AGCACAAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTGAGCGTGCGGCCGTCT 1395 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| || || ||||| || ||||| |||||||| || || || ||| Sbjct 1394 TCGAGCTGCTTGCCCGCAAAGATCAGGCGCTGTTGGTCCGGGGGGATGCCCTCCTTGTCC 1335 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || | ||| ||| ||| |||| ||||| | | || || || | |||||||||| Sbjct 1334 TGGACCTTGGACTTGACGACGTCGATCGTGTCGCTCGACTCGACCTCGAGCGTGATCGTC 1275 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || |||||||| || || | || ||||| Sbjct 1274 TTGCCCGTGAGCGTCTTGATGAAGATTTG 1246 >seq1186 Length=2681 Score = 116 bits (128), Expect = 9e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || |||||||| ||||||||||| |||| ||||||||| | || | || || Sbjct 2492 AGCACCAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTGAGCGTGCGGCCGTCC 2433 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| || || |||||||| |||||||||||||| || || || ||| Sbjct 2432 TCGAGCTGCTTGCCCGCAAAGATGAGCCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCC 2373 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || | ||| ||| ||| |||| ||||| | | || || || | |||||||||| Sbjct 2372 TGGACCTTGGACTTGACGACGTCGATCGTGTCGCTCGACTCGACCTCGAGCGTGATCGTC 2313 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || |||||||| || || | || ||||| Sbjct 2312 TTGCCCGTGAGCGTCTTGATGAAGATTTG 2284 >seq1333 Length=2152 Score = 104 bits (114), Expect = 6e-17 Identities = 89/110 (81%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || || | |||||| ||||| || ||||||||||| |||| ||||||||| || || Sbjct 329 CGCAGGCGCAGGACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGCGTG 270 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGG 199518 | || || || |||||||| ||||| ||||||||||||||||||||||| Sbjct 269 CGCCCGTCCTCGAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGGTCCGG 220 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178860379706551