Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001264865.1_202015-08-11] 4,053 sequences; 15,232,490 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq3913 127 3e-24 seq1459 127 3e-24 seq2027 107 2e-18 seq3973 100 4e-16 >seq3913 Length=3884 Score = 127 bits (140), Expect = 3e-24 Identities = 313/465 (67%), Gaps = 10/465 (2%) Strand=Plus/Plus Query 112006 TCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAG 112065 |||| || ||||| |||||| |||| | | ||||| | || |||| ||||| | Sbjct 56 TCTACCTCGAGCCGTGGCACTCGGACGTGTTTGAGTTTATCGACCTGCGCAAGAACCACG 115 Query 112066 GTGATGAGGAGGCGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCA 112125 | | || |||| ||| ||||| || || | ||| || ||| | || || || || | Sbjct 116 GCAAGGAAGAGGTGCGCGCGCGCGACCTGTTTTACGCGCTGTGGGTGCCCGACCTGTTTA 175 Query 112126 TGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTC 112185 || | || ||| || | ||| | ||| | || | || || | | |||| ||||| | Sbjct 176 TGCGCCGTGTCGAGCAGGGCGGCGACTGGACGCTGATGTGCCCCGCCGAGGCGCCCGGCC 235 Query 112186 TCTCCGA-TGCCGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGT 112244 | |||| ||| ||| || |||||||| || || ||| |||||| || | Sbjct 236 TGGCCGACTGCTATGGC-GAAGAGTTTGACGCGCTGTACGAGCGCTACGAGCGCGAGGGC 294 Query 112245 CG-GGCGACTGCGACGGTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAA 112302 || ||| | || || || | || || || | | ||| | || || ||| || | || | Sbjct 295 CGCGGCAAGCGC-ACCGT-CAAGGCGCAGAAGCTCTGGTACGCGATCCTCGAGGCGCAGA 352 Query 112303 CCGAGACTGGTACACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAA 112362 |||||| || || || | |||||| ||||| || ||| |||| ||||| || || | Sbjct 353 TCGAGACGGGCACGCCGTTTATGCTCTACAAGGATGCCGCGAACCGCAAGAGCAACCAGA 412 Query 112363 AGAATTTGGGTGTGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAG--A 112420 |||| | || ||||||||||| || ||||| || || || || |||| ||||| Sbjct 413 AGAACGTCGGCGTGATCAAGAGCTCGAACCTGTGCACCGAGATTATGGA--GTACAGCTC 470 Query 112421 CAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCC 112465 || |||||||| ||||| |||||||| || ||||| ||||| Sbjct 471 GCCGGACGAGACGGCGGTGTGCAACCTCGCCTCGATCGCGCTCCC 515 >seq1459 Length=1921 Score = 127 bits (140), Expect = 3e-24 Identities = 311/464 (67%), Gaps = 8/464 (2%) Strand=Plus/Minus Query 112006 TCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAG 112065 |||| || ||||| |||||| |||| | | ||||| | || |||| ||||| | Sbjct 1866 TCTACCTCGAGCCGTGGCACTCGGACGTGTTTGAGTTTATCGACCTGCGCAAGAACCACG 1807 Query 112066 GTGATGAGGAGGCGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCA 112125 | | || |||| ||| ||||| || |||| ||| || ||| | || || || || | Sbjct 1806 GCAAGGAAGAGGTGCGCGCGCGCGACCTGTTCTACGCGCTGTGGGTGCCGGACCTGTTTA 1747 Query 112126 TGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTC 112185 || | || ||| || | ||| | ||| | || | || || | | |||| ||||| | Sbjct 1746 TGCGCCGTGTCGAGCAGGGCGGCGACTGGACGCTGATGTGCCCCGCCGAGGCGCCCGGCC 1687 Query 112186 TCTCCGATGCCGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTC 112245 || |||| | || ||||||||||| | || ||| |||||| || | | Sbjct 1686 TCGCCGACTGCTACGGCGAGGAGTTTGACGAGCTGTACGAGCGCTACGAGCGCGAGGGCC 1627 Query 112246 G-GGCGACTGCGACGGTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAAC 112303 | ||| | || || || | || || || | | ||| | || || ||| || | || | Sbjct 1626 GCGGCAAGCGC-ACCGT-CAAGGCGCAGAAGCTCTGGTACGCGATCCTCGAGGCGCAGAT 1569 Query 112304 CGAGACTGGTACACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAA 112363 ||||| || || || | ||||| ||||| |||||| |||| ||||| || || || Sbjct 1568 TGAGACGGGCACGCCGTTCATGCTCTACAAGGACGCCGCGAACCGCAAGAGCAACCAGAA 1509 Query 112364 GAATTTGGGTGTGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAG--AC 112421 ||| | || ||||||||||| || ||||| || || || ||| |||| ||||| Sbjct 1508 GAACGTCGGCGTGATCAAGAGCTCGAACCTGTGCACCGAGATCATGGA--GTACAGCTCG 1451 Query 112422 AAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCC 112465 || |||||||| ||||| |||||||| || || || ||||| Sbjct 1450 CCCGACGAGACGGCGGTGTGCAACCTCGCGTCGATTGCGCTCCC 1407 >seq2027 Length=1134 Score = 107 bits (118), Expect = 2e-18 Identities = 117/153 (76%), Gaps = 2/153 (1%) Strand=Plus/Minus Query 102180 GAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCG-C 102238 ||||| || | || ||||| || ||||| ||||||||||| || || ||| ||| | Sbjct 205 GAGCGCCTTGTGGCGTTTGCCGCCGTCGAGGGCATCTTCTTCTCGGGGTCGTTC-GCGTC 147 Query 102239 TATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTAT 102298 || | |||||||||||||| ||||| ||||| || || | ||||| |||||||| || Sbjct 146 GATCTTCTGGCTCAAGAAGCGCGGTCTGATGCCCGGCCTGTCGTTCTCGAACGAGCTCAT 87 Query 102299 CTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 102331 ||| ||||||||||| || ||| || ||||| Sbjct 86 CTCGCGTGACGAGGGTCTGCACACCGACTTTGC 54 >seq3973 Length=3410 Score = 100 bits (110), Expect = 4e-16 Identities = 114/153 (75%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 102180 GAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCT 102239 ||||| || | || ||||| || ||||| ||||||||||| || || || | | Sbjct 224 GAGCGCCTTGTGGCGTTTGCCGCCGTGGAGGGCATCTTCTTCTCGGGCTCGTTTGCCTCG 165 Query 102240 ATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATC 102299 || | ||||| |||||||| ||||| ||||| || || | ||||| |||||||| ||| Sbjct 164 ATCTTCTGGCTGAAGAAGCGCGGTCTGATGCCCGGCCTGTCGTTCTCGAACGAGCTCATC 105 Query 102300 TCTCGTGACGAGGGACTCCACCAAGAGTTTGCG 102332 || ||||||||||| || ||| || |||||| Sbjct 104 TCGCGTGACGAGGGTCTGCACACCGACTTTGCG 72 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620710951638160