Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001264865.1_202015-08-11] 4,053 sequences; 15,232,490 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq1887 91.5 1e-13 seq1321 91.5 1e-13 >seq1887 Length=20729 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 48564 TGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGC 48623 || ||||| ||| || || || ||||| || ||| | ||| |||| |||| ||| Sbjct 2283 TGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGAGTACGACCGTCTTCCAGTTGC 2224 Query 48624 TTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTT 48683 |||||||| || ||||| ||||| || |||| ||||| ||||||||||| |||||| Sbjct 2223 TTACCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATACCCTCCTTGTCCTGAATCTTG 2164 Query 48684 TGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTC 48743 || ||| | | | || |||| ||||| |||| ||| ||||| || || || Sbjct 2163 GCCTTCACATTTTCAATCGTATCGGACGATTCCACTTCCAGCGTGATCGTCTTGCCAGTG 2104 Query 48744 AAAGTTTTTACAAAAATCTGCAT 48766 | || || || || | |||||| Sbjct 2103 AGCGTCTTGACGAACACCTGCAT 2081 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 48564 TGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGC 48623 || ||||| ||| || || || ||||| || ||| | ||| |||| |||| ||| Sbjct 2739 TGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGAGTACGACCGTCTTCCAGTTGC 2680 Query 48624 TTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTT 48683 |||||||| || ||||| ||||| || |||| ||||| ||||||||||| |||||| Sbjct 2679 TTACCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATACCCTCCTTGTCCTGAATCTTG 2620 Query 48684 TGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTC 48743 || || | | || || |||| ||||| |||| ||| ||||| || || || Sbjct 2619 GCCTTGACGTTCTCGATAGTGTCGGACGATTCCACTTCCAGCGTGATCGTCTTACCAGTG 2560 Query 48744 AAAGTTTTTACAAAAATCTGCAT 48766 | || || || || | |||||| Sbjct 2559 AGTGTCTTGACGAACACCTGCAT 2537 Score = 86.0 bits (94), Expect = 5e-12 Identities = 112/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 48612 TCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTG 48671 || || | |||||| |||||||| ||||| |||||||| |||| ||||| ||||||||| Sbjct 2463 TCCTCAAGCTGCTTGCCGGCAAAGATCAGGCGCTGTTGGTCCGGGGGAATACCCTCCTTG 2404 Query 48672 TCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATC 48731 || |||||| || || | | | || |||| ||| ||||| | |||||| Sbjct 2403 TCCTGAATCTTGGCCTTGACGTTCTCGATCGTGTCGGACGACTCGACCTCGAGCGTAATG 2344 Query 48732 GTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || ||||| | ||| || || || | |||||| Sbjct 2343 GTCTTGCCCGTAAGAGTCTTGACGAACACCTGCAT 2309 >seq1321 Length=24366 Score = 91.5 bits (100), Expect = 1e-13 Identities = 147/210 (70%), Gaps = 1/210 (0%) Strand=Plus/Plus Query 48564 TGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGC 48623 || ||||| ||| || || || ||||| || || | || | || || | |||| Sbjct 74 TGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTACGGCCATCCTCGAGCTGC 133 Query 48624 TTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTT 48683 || || ||||| ||||| |||||||| |||| |||| |||||||||||| |||||| Sbjct 134 TTGCCCGCAAAGATCAGACGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCTTGGATCTTT 193 Query 48684 TGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTC 48743 || || | | | || |||| ||| || || | || ||||| ||||| ||| Sbjct 194 GCCTTGACGTTCTCGATCGTGTCGGACGACTCGACTTCGAGTGTGATCGTCTTTCCTGTC 253 Query 48744 AAAGTTTTTACAAAAATCTGCATCGTGTGT 48773 | ||| ||||| |||| |||||| |||||| Sbjct 254 AGAGTCTTTACGAAAACCTGCAT-GTGTGT 282 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380918783230119