Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Malassezia_20furfur_20[genbank_20GCA_5F001264865.1_202015-08-11]
4,053 sequences; 15,232,490 total letters
Query= NC_023442.1
Length=120420
Score E
Sequences producing significant alignments: (Bits) Value
seq1887 84.2 2e-11
>seq1887
Length=20729
Score = 84.2 bits (92), Expect = 2e-11
Identities = 157/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| || | || ||| || || | |||||||| || || || || ||||| || ||
Sbjct 2307 CCACCACGCAGACGAAGGACGAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTC 2248
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| || ||| || || ||||| || || || | |||| | ||||| ||||| |||
Sbjct 2247 AGAGTACGACCGTCTTCCAGTTGCTTACCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGA 2188
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738
|||||||| ||||| || ||| || | || ||| |||| | || || || ||| ||
Sbjct 2187 ATACCCTCCTTGTCCTG-AATCTTGGCCTTCACATTTTCAATCGTATCGGACGATTCCAC 2129
Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
||| || || || || |||||||| | || || || || | ||||||
Sbjct 2128 TTCCAGCGTGATCGTCTTGCCAGTGAGCGTCTTGACGAACACCTGCAT 2081
Score = 84.2 bits (92), Expect = 2e-11
Identities = 157/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| || | || ||| || || | |||||||| || || || || ||||| || ||
Sbjct 2763 CCACCACGCAGACGGAGGACGAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTC 2704
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| || ||| || || ||||| || || || | |||| | ||||| ||||| |||
Sbjct 2703 AGAGTACGACCGTCTTCCAGTTGCTTACCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGA 2644
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738
|||||||| ||||| || ||| || | ||||| | || | |||||| || ||| ||
Sbjct 2643 ATACCCTCCTTGTCCTG-AATCTTGGCCTTGACGTTCTCGATAGTGTCGGACGATTCCAC 2585
Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
||| || || || || || ||||| | || || || || | ||||||
Sbjct 2584 TTCCAGCGTGATCGTCTTACCAGTGAGTGTCTTGACGAACACCTGCAT 2537
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 385200171736473
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |