Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001264865.1_202015-08-11] 4,053 sequences; 15,232,490 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq1887 138 2e-27 seq1831 125 1e-23 >seq1887 Length=20729 Score = 138 bits (152), Expect = 2e-27 Identities = 168/229 (73%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || | || ||| || || | ||| || || || || ||||| || || || || Sbjct 2309 TACCACCACGCAGACGAAGGACGAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGC 2250 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 ||| | | ||||||||| ||||| || || || ||||| || | || || || || | Sbjct 2249 TCAGAGTACGACCGTCTTCCAGTTGCTTACCGGCGAAGATCAGGCGCTGCTGGTCCGGGG 2190 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || || ||||| || |||||||| || || ||||||||||||||||| | ||| | Sbjct 2189 GAATACCCTCCTTGTCCTGAATCTTGGCCTTCACATTTTCAATCGTATCGGACGATTCCA 2130 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||||| || ||||||||||| || | |||||| || || | |||||| Sbjct 2129 CTTCCAGCGTGATCGTCTTGCCAGTGAGCGTCTTGACGAACACCTGCAT 2081 >seq1831 Length=21170 Score = 125 bits (138), Expect = 1e-23 Identities = 165/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || | | ||| || || ||||| || || || || ||||| || || || || Sbjct 229 TACCACCACGAAGACGGAGGACCAAGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGC 170 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 || | | || || || || || || || |||||||| || | ||||| || |||| Sbjct 169 TCAGGGTACGGCCATCCTCGAGCTGCTTGCCCGCAAAGATCAGACGCTGTTGGTCCGGAG 110 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || || ||||||||||||||||| || || || |||||||| || ||| | ||| | Sbjct 109 GAATGCCCTCCTTATCTTGAATCTTCGCCTTCACGTTTTCAATGGTGTCAGACGATTCCA 50 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||||||| || ||||||||||| || | ||||| || || | ||||| Sbjct 49 CTTCCAATGTAATCGTCTTGCCCGTAAGGGTCTTGACGAAGACTTGCAT 1 Score = 100 bits (110), Expect = 6e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 82583 ACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGA 82642 ||| || | || ||| || || | ||| || || || || ||||| || || || ||| Sbjct 456 ACCACCACGCAGACGGAGGACGAGGTGAAGCGTCGACTCCTTCTGAATGTTGTAGTCACT 397 Query 82643 TAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGG 82702 || | | || || || || || || ||||||||||| || | ||||| || ||||| Sbjct 396 GAGCGTGCGGCCATCCTCAAGCTGCTTGCCAGCAAAGATCAGACGCTGTTGGTCCGGAGG 337 Query 82703 TATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTAC 82762 || || ||||| || |||||||| || || || || || ||||| || | || || Sbjct 336 AATGCCCTCCTTGTCCTGAATCTTCGCCTTGACGTTCTCGATCGTGTCCGAGGACTCAAC 277 Query 82763 TTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||| | || ||||||||||| || | ||||| || || | ||||| Sbjct 276 TTCGAGCGTAATCGTCTTGCCCGTAAGGGTCTTGACGAAGACTTGCAT 229 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981776214633967