Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001264865.1_202015-08-11] 4,053 sequences; 15,232,490 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq3944 163 3e-35 seq1407 163 3e-35 >seq3944 Length=27584 Score = 163 bits (180), Expect = 3e-35 Identities = 481/738 (65%), Gaps = 45/738 (6%) Strand=Plus/Plus Query 146802 GTGCGGGTGGTAGCCCTCGAGGGCAAAATCTTCTGCCCTGAAATCGTCTATGTC-CTC-C 146859 |||||| | ||||| || |||| || || || | ||||||||| |||| ||| | Sbjct 4159 GTGCGGCTCATAGCCAATGACCTCAAAGTCGTCCGCGCGGAAATCGTCAATGTTGCTCAC 4218 Query 146860 A-CCCGCCTCAAAATCTTGAGCTTGGGGAAGGGTCGGGGGTTCCTGGCCAGCTGAATTTT 146918 | |||| | |||||| | ||||||||||||| || | | |||||| | Sbjct 4219 ATCCCGTTT---AATCTTAATTGTGGGGAAGGGTCGCGGCTCGCGCATCAGCTGCTGCTG 4275 Query 146919 CAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCC 146978 || ||||| | ||||||||||| ||||| ||||| |||| || || || || | Sbjct 4276 CAACGGCTCAATATGGTTGAGGTATACGTGAGCGTCACCCATGGCCAGCGTGAATTCGGC 4335 Query 146979 CGGCTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTT 147038 || | || ||||| || || | | || |||||| |||| || || || ||||| Sbjct 4336 CGCTTCGCATCCCGTCACATGTGCGATGAGGTGGGTGAGTAGCGCATAACTTGCAATGTT 4395 Query 147039 GAAGGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCC-- 147096 |||||| || |||| |||| || | ||| | |||||||| |||||| ||||||| | Sbjct 4396 GAAGGGCACGCCCAACCCCAGATCGCACGAGCGCTGGTACATCTGGCATGAGAGCTGCGG 4455 Query 147097 --------------CCG------------TCGGCCACGTAA-----AACTGGCACAGGAT 147125 ||| ||||| || | || ||||||| ||| Sbjct 4456 CTTGCGTCCCACCGCCGCCTCTTCAGGGTTCGGCAGGGTGACAAAGAATTGGCACAAGAT 4515 Query 147126 GTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGCGGGGTTCCAGGCCGAGACCACCAG 147185 || || || |||| |||||| || ||||| | |||||||| || |||| ||| | Sbjct 4516 ATGACAGGGTGGCAATGCCATGAGCGGTAGGTCAGGTGGGTTCCATGCGGAGAGCACAAT 4575 Query 147186 CCGCCTGCTCTCGGGGTTCCTCTTAATCTCTTCGATAACCCACCTCAGCTGGTCCACGCC 147245 || | | ||||||| |||| || | | || ||| ||||||||| || || Sbjct 4576 GCGGCGGTCAGTGGGGTTCGTCTTGATTTGATGAATGACCTGTGCCAGCTGGTCTACACC 4635 Query 147246 CTGGCCCCCGTAGTTTGTCCCGCAGTCCACGTACCTGGCCCCAAAGTGCCTCCACTGGAA 147305 ||| ||| |||| || || ||| |||||| ||| |||||||||| ||| ||||| Sbjct 4636 CTGCCCCGTATAGTCGGTGTCGGCGTCGACGTACTGGGCGCCAAAGTGCCGCCATTGGAA 4695 Query 147306 GCCGTACACTGGCCCCAGGTCGCCGGGCTTTCTGTGCGAGAAGCCCGC-CCGCTTGAGAA 147364 ||||||||| || |||| |||||| || | ||| | || |||| | | ||| | Sbjct 4696 GCCGTACACCGGTCCCAAGTCGCCCGGACGACGGTGTCCG-AGTCCGCGACTCGCGAGGA 4754 Query 147365 ACTCGGGGGACCCGTGGGCGTCCCAGATGCCCAC--TCCCTTGGCGGAGAGCTCCTTAGA 147422 | |||| ||| || | | | ||||||||| ||| | | | | | ||| || | Sbjct 4755 ATTCGGCGGAGCCATTGCCATCCCAGATGTGCACGTTGCGCT--CCGCCAGCCAGTTGGC 4812 Query 147423 GTCCGTGGAGCCCCGGATGAACCAGAGCAGCTCCTCCAAAACCCCCCTCCAAAAGACCCT 147482 |||||| |||| || |||||||| ||||| || | || || | | || || | Sbjct 4813 ATCCGTGTTGCCCGAAATAAACCAGAGAAGCTCTTCGAGTACGCCACGGAAGAAAACGCG 4872 Query 147483 CTTGGTGGTCAGCAGGGG 147500 |||||||| ||||| || Sbjct 4873 TTTGGTGGTGAGCAGCGG 4890 >seq1407 Length=2013 Score = 163 bits (180), Expect = 3e-35 Identities = 373/565 (66%), Gaps = 35/565 (6%) Strand=Plus/Minus Query 146802 GTGCGGGTGGTAGCCCTCGAGGGCAAAATCTTCTGCCCTGAAATCGTCTATGTCCTCCAC 146861 |||||| || ||||| || | || || || || | ||||||||| |||| ||| Sbjct 1980 GTGCGGCTGATAGCCAATGACCTCGAAGTCGTCCGCTCGGAAATCGTCAATGTTGCTCAC 1921 Query 146862 CCGCCTCAAAATCTTGAGCT-TGGGGAAGGGTCGGGGGTTCCTGGCCAGCTGAATTTTCA 146920 || | ||| |||| | ||||||||| || || | | |||||| | || Sbjct 1920 GTCCCGCTTAAT-TTGAATTGTGGGGAAGGCCCGAGGCTCGCGCATCAGCTGCTGCTGCA 1862 Query 146921 GGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCG 146980 | ||||| | |||| |||||| ||||| ||||| |||| || || || || ||| Sbjct 1861 GCGGCTCGATATGGTCGAGGTACACGTGAGCGTCACCCATGGCCAGCGTGAATTCGGCCG 1802 Query 146981 GCTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGA 147040 || | || || ||||| || | | || |||||| |||| |||||| || ||||||| Sbjct 1801 CCTCACATCCCGTGACGTGCGCGATGAGGTGGGTGAGTAGCGCGTAGCTCGCAATGTTGA 1742 Query 147041 AGGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCT------ 147094 |||| || |||| |||| || | ||| | |||||||| |||||||||||||| Sbjct 1741 AGGGCACGCCCAATCCCAGATCGCACGAGCGCTGGTACATCTGGCACGAGAGCTGCGGCT 1682 Query 147095 ----CCC------------------CGTCGGC-----CACGTAAAACTGGCACAGGATGT 147127 ||| |||||| ||| | || |||||||| |||| Sbjct 1681 TGCGCCCTGCCGCCGCCTCCTCAGGGGTCGGCGGGGTGACGAAGAATTGGCACAGAATGT 1622 Query 147128 GGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGCGGGGTTCCAGGCCGAGACCACCAGCC 147187 | || ||||||| |||||| |||| ||| | |||||||| || |||| ||| | | Sbjct 1621 GACAGGGCGGCAAAGCCATGAGTGGCATGTCAGGTGGGTTCCATGCAGAGAGCACAATGC 1562 Query 147188 GCCTGCTCTCGGGGTTCCTCTTAATCTCTTCGATAACCCACCTCAGCTGGTCCACGCCCT 147247 | | | | ||||||| |||| || | | || ||| | |||||| || || |||| Sbjct 1561 GGCGGTCCGTGGGGTTCGTCTTGATTTGATGAATGACCTGCGCCAGCTGATCGACACCCT 1502 Query 147248 GGCCCCCGTAGTTTGTCCCGCAGTCCACGTACCTGGCCCCAAAGTGCCTCCACTGGAAGC 147307 | ||| ||||| || || || ||||| ||| || ||||||| ||| ||||| | Sbjct 1501 GTCCCGTGTAGTCGGTGTCGGCATCAACGTATTGGGCGCCGAAGTGCCGCCATTGGAAAC 1442 Query 147308 CGTACACTGGCCCCAGGTCGCCGGG 147332 | || || || |||| |||||| || Sbjct 1441 CATAGACCGGTCCCAAGTCGCCCGG 1417 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583458439039200