Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001264865.1_202015-08-11] 4,053 sequences; 15,232,490 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq3913 116 5e-21 seq2027 98.7 1e-15 seq1459 98.7 1e-15 seq3973 96.9 4e-15 >seq3913 Length=3884 Score = 116 bits (128), Expect = 5e-21 Identities = 306/462 (66%), Gaps = 4/462 (1%) Strand=Plus/Minus Query 111230 GGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAA 111289 || || ||||| || || | ||||| || |||||||| ||| ||||||| | | Sbjct 515 GGGAGCGCGATCGAGGCGAGGTTGCACACCGCCGTCTCGTCCGGCGAGCTGTACTCCATA 456 Query 111290 ATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTG 111349 || || || || | ||| || ||||| ||| || | ||||| ||||| ||||| | Sbjct 455 ATCTCGGTGCACAGGTTCGAGCTCTTGATCACGCCGACGTTCTTCTGGTTGCTCTTGCGG 396 Query 111350 TTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATA 111409 || ||||||||||||||||| | ||||| |||||||| |||| | | ||| || Sbjct 395 TTCGCGGCATCCTTGTAGAGCATAAACGGCGTGCCCGTCTCGATCTGCGCCTCGAGGATC 336 Query 111410 GCCTTCCA-AACATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTT 111468 || | ||| | | || ||| || | || || ||| | || ||||| |||||| Sbjct 335 GCGTACCAGAGCTTCTGCGCCTTG-ACGGTGCGCTTGCCGCGGCCCTCGCGCTCGTAGCG 277 Query 111469 TGTGTAGAGGGCTTCAAACTCCTCACCCACCGC-GTCGGAGAGACCTGGTGCCTTGTCTG 111527 ||| || || |||||||| || ||| || ||||| || || || |||| | | | Sbjct 276 CTCGTACAGCGCGTCAAACTCTTC-GCCATAGCAGTCGGCCAGGCCGGGCGCCTCGGCGG 218 Query 111528 GACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCC 111587 | || | || | ||| | || || | ||| || || ||| || ||||| || | || Sbjct 217 GGCACATCAGCGTCCAGTCGCCGCCCTGCTCGACACGGCGCATAAACAGGTCGGGCACCC 158 Query 111588 ACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACT 111647 |||| | |||| || || | || ||||||| | || ||||| || | | Sbjct 157 ACAGCGCGTAAAACAGGTCGCGCGCGCGCACCTCTTCCTTGCCGTGGTTCTTGCGCAGGT 98 Query 111648 CAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGA 111689 | | ||||| | | |||| |||||| ||||| || |||| Sbjct 97 CGATAAACTCAAACACGTCCGAGTGCCACGGCTCGAGGTAGA 56 >seq2027 Length=1134 Score = 98.7 bits (108), Expect = 1e-15 Identities = 121/163 (74%), Gaps = 2/163 (1%) Strand=Plus/Plus Query 122658 GGCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACC 122717 |||||| || ||| |||||||| || || || || || || || ||||| | || || Sbjct 53 GGCAAAGTCGGTGTGCAGACCCTCGTCACGCGAGATGAGCTCGTTCGAGAACGACAGGCC 112 Query 122718 TGGCATGAGACCCCGCTTCTTCAACCAATAAATAG-CGCAGAATGACCCGGAGAAGAAGA 122776 ||||| ||||| |||||||| | ||| | || | ||| ||| ||||| |||||||||| Sbjct 113 GGGCATCAGACCGCGCTTCTTGAGCCAGAAGATCGACGC-GAACGACCCCGAGAAGAAGA 171 Query 122777 TACCCTCCACACACGCAAACGCAAAAAGGCGTTCGGCGAAGGA 122819 | ||||| || |||||||| | |||||| || | ||| || Sbjct 172 TGCCCTCGACGGCGGCAAACGCCACAAGGCGCTCCGAGAACGA 214 >seq1459 Length=1921 Score = 98.7 bits (108), Expect = 1e-15 Identities = 300/461 (65%), Gaps = 2/461 (0%) Strand=Plus/Plus Query 111230 GGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAA 111289 || || || || || || | ||||| || |||||||| || ||||||| | Sbjct 1407 GGGAGCGCAATCGACGCGAGGTTGCACACCGCCGTCTCGTCGGGCGAGCTGTACTCCATG 1466 Query 111290 ATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTG 111349 || || || || | ||| || ||||| ||| || | ||||| ||||| ||||| | Sbjct 1467 ATCTCGGTGCACAGGTTCGAGCTCTTGATCACGCCGACGTTCTTCTGGTTGCTCTTGCGG 1526 Query 111350 TTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATA 111409 || || ||||||||||||||| | ||||| |||||||| |||| | | ||| || Sbjct 1527 TTCGCGGCGTCCTTGTAGAGCATGAACGGCGTGCCCGTCTCAATCTGCGCCTCGAGGATC 1586 Query 111410 GCCTTCCA-AACATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTT 111468 || | ||| | | || ||| || | || || ||| | || ||||| |||||| Sbjct 1587 GCGTACCAGAGCTTCTGCGCCTTG-ACGGTGCGCTTGCCGCGGCCCTCGCGCTCGTAGCG 1645 Query 111469 TGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGG 111528 ||| || | ||||||||||| || ||||| ||| || || |||| | | || Sbjct 1646 CTCGTACAGCTCGTCAAACTCCTCGCCGTAGCAGTCGGCGAGGCCGGGCGCCTCGGCGGG 1705 Query 111529 ACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCA 111588 || | || | ||| | || || | ||| || || ||| || ||||| || | ||| Sbjct 1706 GCACATCAGCGTCCAGTCGCCGCCCTGCTCGACACGGCGCATAAACAGGTCCGGCACCCA 1765 Query 111589 CAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTC 111648 ||| | | || || || | || ||||||| | || ||||| || | || Sbjct 1766 CAGCGCGTAGAACAGGTCGCGCGCGCGCACCTCTTCCTTGCCGTGGTTCTTGCGCAGGTC 1825 Query 111649 AAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGA 111689 | ||||| | | |||| |||||| ||||| || |||| Sbjct 1826 GATAAACTCAAACACGTCCGAGTGCCACGGCTCGAGGTAGA 1866 >seq3973 Length=3410 Score = 96.9 bits (106), Expect = 4e-15 Identities = 118/161 (73%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 122659 GCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCT 122718 ||||| || ||| |||||||| || || || || || || || ||||| | || || Sbjct 73 GCAAAGTCGGTGTGCAGACCCTCGTCACGCGAGATGAGCTCGTTCGAGAACGACAGGCCG 132 Query 122719 GGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATA 122778 ||||| ||||| |||||||||| ||| | || | | || || || ||||||||||| Sbjct 133 GGCATCAGACCGCGCTTCTTCAGCCAGAAGATCGAGGCAAACGAGCCCGAGAAGAAGATG 192 Query 122779 CCCTCCACACACGCAAACGCAAAAAGGCGTTCGGCGAAGGA 122819 |||||||| |||||||| | |||||| || | ||| || Sbjct 193 CCCTCCACGGCGGCAAACGCCACAAGGCGCTCCGAGAACGA 233 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628000182328800