Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001264865.1_202015-08-11] 4,053 sequences; 15,232,490 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq3913 143 3e-29 seq3973 131 2e-25 seq2027 114 2e-20 >seq3913 Length=3884 Score = 143 bits (158), Expect = 3e-29 Identities = 647/1016 (64%), Gaps = 12/1016 (1%) Strand=Plus/Minus Query 118155 AACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCA 118214 ||||| |||||||| ||| | || || || ||| ||||||| |||||||||||||| Sbjct 1070 AACTCGCCCGCGAGCACGCGGCGCATGTAAATGTTGCTCGTGTACGGCTCAAAGCACTCG 1011 Query 118215 TTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTA 118274 ||| || | ||| ||| ||||| || |||||||| || |||| ||| || ||| Sbjct 1010 TTGAAGCCGAGGATCTGGCTCGTGGACGCCGTGGGCATCGGCGCCAGGAGCAGCGAGTTG 951 Query 118275 CGGAGACCCTTTTCCCTAATGCGTTCCTTGAGAGCGTCCCAGTCGTAGTTGAGCTTTGTC 118334 || || || | || ||| ||||||| | | ||||||| || | | | | Sbjct 950 CGCAGGCCGTGCTCGGCAATCTTGGCCTTGAGCGAGGCCCAGTCCCAGAGGTCGGTGGGC 891 Query 118335 TCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTC 118394 | | ||| | || |||| || | || || ||||| || ||||| | ||| Sbjct 890 GTCTTGTTCCAGAGGTCGTACTGCAGTAGGCCCTGCGACGCAGGGCTCCCCTCGTACGTC 831 Query 118395 TCATATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATT 118454 || || || ||||| | | |||| ||| || ||| || || ||||| || || Sbjct 830 TCGTACGGCCCCTCGATGGCGGCCAGCTCGCAGGAGCGCTCAAGCGCCGCGTGGTAGATC 771 Query 118455 GTTTCAAAAATGCGAGCATTCATTGCCTTG-GCCTCGTCGGAATCAAACGCGAGTCGGCA 118513 || ||||| || | || | || | |||||| || || |||| || || Sbjct 770 GTCTCAAAGATCTGCAGGTTGAG-GCGGCGCGCCTCGGCGCTGTCGAACG-GATAGCCCA 713 Query 118514 CAAA-ATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATAT 118572 | || || ||||||| || || |||||||| | ||| || |||||||| | ||| | Sbjct 712 TGATCATGAACGCATCCGCCAGGCCCTGGACACCAATGCCGATCGGGCGATGGCGCATGT 653 Query 118573 TAGACTTCCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTT 118632 | || || || | ||| | ||| || | || | || || | | || || || | Sbjct 652 TGGAGCGGCGCGCCGACTCGATGGGGTAGTAGTTGATGTCAATGATGCGGTTCAGGTTCT 593 Query 118633 TGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACT-----GCGAGTCTC 118687 || || ||||| | | || || || | | | | | | ||| | | Sbjct 592 TGCACACGACCTTGGCCGTGTCGTGCAGGCGCTGGAAGTTGTACGTCTTGTGCGCGCCGG 533 Query 118688 TTCATT-GACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCT 118746 | | | || | || | || || ||||| || || || || ||||| | ||||| ||| Sbjct 532 TGCCCTCGATAAACGTCGGGAGCGCGATCGAGGCGAGGTTGCACACCGCCGTCTCGTCCG 473 Query 118747 TATCAGTGTACTCTATAATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCT 118806 ||||||| ||||| || ||||||| ||| || ||||| || ||| | ||||| Sbjct 472 GCGAGCTGTACTCCATAATCTCGGTGCACAGGTTCGAGCTCTTGATCACGCCGACGTTCT 413 Query 118807 TTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCG 118866 | || || ||| ||| ||||||||||| ||||| | ||||| |||||||| Sbjct 412 TCTGGTTGCTCTTGCGGTTCGCGGCATCCTTGTAGAGCATAAACGGCGTGCCCGTCTCGA 353 Query 118867 TTTGGGACTTGAGAATAGCCTTCCAGA-CATCGGCAGCTGGCACAGTGGCGTTGGCTCGC 118925 | || | || ||| || || | ||||| | || || || | || ||| ||| | || Sbjct 352 TCTGCGCCTCGAGGATCGCGTACCAGAGCTTCTGCGCCTTG-ACGGTGCGCTTGCCGCGG 294 Query 118926 CCCTCTTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGC 118985 ||||| |||||| ||| || || ||||||||||| || | || | || Sbjct 293 CCCTCGCGCTCGTAGCGCTCGTACAGCGCGTCAAACTCTTCGCCATAGCAGTCGGCCAGG 234 Query 118986 CCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATG 119045 || || |||| | ||||| | || | ||| | || |||| ||| || || ||| Sbjct 233 CCGGGCGCCTCGGCGGGGCACATCAGCGTCCAGTCGCCGCCCTGCTCGACACGGCGCATA 174 Query 119046 AAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCC 119105 || ||||| || | ||| ||||| | || || || || ||| | ||||| | || Sbjct 173 AACAGGTCGGGCACCCACAGCGCGTAAAACAGGTCGCGCGCGCGCACCTCTTCCTTGCCG 114 Query 119106 TGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTA 119161 || || |||| || | ||| || | | |||| ||||||||| || ||||| Sbjct 113 TGGTTCTTGCGCAGGTCGATAAACTCAAACACGTCCGAGTGCCACGGCTCGAGGTA 58 >seq3973 Length=3410 Score = 131 bits (144), Expect = 2e-25 Identities = 120/152 (79%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 130016 GCAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 130075 ||||| || ||| |||||||||||||| |||||||| || |||||||| |||| || Sbjct 73 GCAAAGTCGGTGTGCAGACCCTCGTCACGCGAGATGAGCTCGTTCGAGAACGACAGGCCG 132 Query 130076 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 130135 ||||| ||||| |||||||||| |||||| |||| ||| ||||| ||||||||||| Sbjct 133 GGCATCAGACCGCGCTTCTTCAGCCAGAAGATCGAGGCAAACGAGCCCGAGAAGAAGATG 192 Query 130136 CCCTCCACACACGCGAACGCAAAGAGACGCTC 130167 |||||||| || ||||| | || ||||| Sbjct 193 CCCTCCACGGCGGCAAACGCCACAAGGCGCTC 224 >seq2027 Length=1134 Score = 114 bits (126), Expect = 2e-20 Identities = 117/153 (76%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 130015 GGCAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACC 130074 |||||| || ||| |||||||||||||| |||||||| || |||||||| |||| || Sbjct 53 GGCAAAGTCGGTGTGCAGACCCTCGTCACGCGAGATGAGCTCGTTCGAGAACGACAGGCC 112 Query 130075 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGAT 130134 ||||| ||||| |||||||| | |||||| |||| || || || ||||||||||| Sbjct 113 GGGCATCAGACCGCGCTTCTTGAGCCAGAAGATCGACGCGAACGACCCCGAGAAGAAGAT 172 Query 130135 CCCCTCCACACACGCGAACGCAAAGAGACGCTC 130167 ||||| || || ||||| | || ||||| Sbjct 173 GCCCTCGACGGCGGCAAACGCCACAAGGCGCTC 205 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618403868526680