Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001264865.1_202015-08-11] 4,053 sequences; 15,232,490 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq3220 141 3e-28 seq1831 132 1e-25 seq1887 129 2e-24 >seq3220 Length=14384 Score = 141 bits (156), Expect = 3e-28 Identities = 456/705 (65%), Gaps = 11/705 (2%) Strand=Plus/Minus Query 349199 GCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGT 349258 ||||| || || || || |||||||| || || ||||| || || ||||| || || ||| Sbjct 10631 GCTATTGGTATTGACTTGGGTACTACCTACTCGTGTGTGGCCGTCTGGCAGAACGACCGT 10572 Query 349259 GTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACC 349318 || || | ||||| || || || || ||| | || ||||| || |||||||| || ||| Sbjct 10571 GTTGAGGTCATTGCCAACGACCAGGGCAACCGTACGACGCCCTCGTACGTTGCCTTCACC 10512 Query 349319 GAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAAT 349378 || || |||||| | || ||||| | || || || || | || || || | || Sbjct 10511 GACACCGAGCGTCTCATCGGTGACGCCGCCAAGAACCAGGTGGCGATGAACCCGCATAAC 10452 Query 349379 ACGGTTTTTGATGCTAAGCGACTTATTGGTAG-AAGTTTTTCTGACAAATCTACA---CA 349434 || || || || || ||||| || || ||| | |||||| || | || || Sbjct 10451 ACCGTCTTCGACGCCAAGCGTCTCATCGGTCGCAAGTTT----GAGGACCCTGAGGTGCA 10396 Query 349435 ATCTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTAT 349494 | || | || || | || || || || || | || || || || | || Sbjct 10395 GGCCGACATGAAGCACTGGCCCTTCACCGTCGTCGCCCGCGATGGC---AAGCCCGTCAT 10339 Query 349495 TGAGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGT 349554 |||| || || || || || | || || ||||| || || || | ||||| Sbjct 10338 CCAGGTGGAGTACAAGGGCGAGAAGAAGACCTTCACCCCCGAGGAGATCTCGGCCATGGT 10279 Query 349555 TTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGT 349614 | || ||| || || || || || || | |||| || || | || || || Sbjct 10278 CCTCACCAAGATGCGCGAGATCGCCGAGGCCTACCTCGGTGGCACCGTCAAGGACGCCGT 10219 Query 349615 TATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAG 349674 || || || || ||||| || || || | ||||| || || || || ||||| Sbjct 10218 GATCACGGTCCCGGCCTACTTCAACGACTCGCAGCGCCAGGCCACCAAGGACGCTGGTGT 10159 Query 349675 CATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATA 349734 |||||||| | || || || | || || || || || || || || || ||||| || Sbjct 10158 GATTGCGGGCCTCAACGTGCTCCGTATCATCAACGAGCCGACCGCCGCCGCGATTGCGTA 10099 Query 349735 TGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGG 349794 || || || || | | ||| || || || | || || || || | |||||||| Sbjct 10098 CGGTCTCGACAAGAAGTCGGACAGCGAGAAGAACGTGCTCATCTTCGACCTGGGTGGTGG 10039 Query 349795 TACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGC 349854 ||| || ||||| || || || || |||| ||||| || || || || || || || || Sbjct 10038 TACCTTCGATGTGTCGCTCCTGACCATTGAGGAGGGTATCTTCGAGGTCAAGGCCACCGC 9979 Query 349855 TGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGT 349899 ||||| || || || ||||| || || ||||| || || || || Sbjct 9978 CGGTGACACGCACCTGGGTGGTGAGGACTTTGACAACCGCCTGGT 9934 >seq1831 Length=21170 Score = 132 bits (146), Expect = 1e-25 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 140510 ACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGA 140569 ||||||||| | | || || || ||||| || ||||| || ||||| || || ||| Sbjct 456 ACCACCACGCAGACGGAGGACGAGGTGAAGCGTCGACTCCTTCTGAATGTTGTAGTCACT 397 Query 140570 TAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGG 140629 | || || ||||| ||||| || || ||||||||||| ||||| || || || ||||| Sbjct 396 GAGCGTGCGGCCATCCTCAAGCTGCTTGCCAGCAAAGATCAGACGCTGTTGGTCCGGAGG 337 Query 140630 AATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAAC 140689 ||| || || || |||||||| || || || || || || |||| || || | ||||| Sbjct 336 AATGCCCTCCTTGTCCTGAATCTTCGCCTTGACGTTCTCGATCGTGTCCGAGGACTCAAC 277 Query 140690 TTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 ||| || |||| ||||| || || || || || || || | ||||| Sbjct 276 TTCGAGCGTAATCGTCTTGCCCGTAAGGGTCTTGACGAAGACTTGCAT 229 Score = 120 bits (132), Expect = 9e-22 Identities = 167/234 (71%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 140504 TTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATA 140563 || |||||||||||| | | || || | ||||| || ||||| || || || || || Sbjct 234 TTGCATACCACCACGAAGACGGAGGACCAAGTGAAGCGTCGACTCCTTCTGGATGTTGTA 175 Query 140564 ATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATC 140623 || | || || ||||| || || || || || |||||||| ||||| || || || Sbjct 174 GTCGCTCAGGGTACGGCCATCCTCGAGCTGCTTGCCCGCAAAGATCAGACGCTGTTGGTC 115 Query 140624 AGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGG 140683 |||||||| || || ||||| ||||| || || || || || ||||| | ||||| | Sbjct 114 CGGAGGAATGCCCTCCTTATCTTGAATCTTCGCCTTCACGTTTTCAATGGTGTCAGACGA 55 Query 140684 TTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 ||| ||||| | ||||| ||||| || || || || || || || | ||||| Sbjct 54 TTCCACTTCCAATGTAATCGTCTTGCCCGTAAGGGTCTTGACGAAGACTTGCAT 1 >seq1887 Length=20729 Score = 129 bits (142), Expect = 2e-24 Identities = 167/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || || || ||||| || ||||| || || || || || || Sbjct 2311 CATACCACCACGCAGACGAAGGACGAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTC 2252 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 | || || || ||||| ||||| || || || ||||| || || ||||| || || Sbjct 2251 GCTCAGAGTACGACCGTCTTCCAGTTGCTTACCGGCGAAGATCAGGCGCTGCTGGTCCGG 2192 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 ||||| || || || |||||||| || || || ||||| ||||||| ||| || | ||| Sbjct 2191 GGGAATACCCTCCTTGTCCTGAATCTTGGCCTTCACATTTTCAATCGTATCGGACGATTC 2132 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 ||||| || || | ||||| || || || || || || || | |||||| Sbjct 2131 CACTTCCAGCGTGATCGTCTTGCCAGTGAGCGTCTTGACGAACACCTGCAT 2081 Score = 114 bits (126), Expect = 4e-20 Identities = 164/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || ||||| ||||| || || || || || || || || || Sbjct 1855 CATACCACCACGCAGGCGGAGGACAAGGTGAAGTGTCGATTCCTTCTGGATGTTGTAGTC 1796 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 | || || |||| ||||| || || ||||| ||||| || || ||||| || || Sbjct 1795 GCTCAGCGTACGGTCATCCTCAAGCTGCTTGCCAGCGAAGATAAGGCGCTGCTGGTCCGG 1736 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 ||||| || || || ||||| || || || || || || || |||| || || | || Sbjct 1735 GGGAATACCCTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCGATCGTGTCGGACGACTC 1676 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || |||| |||||||| || || || || || |||| |||||| Sbjct 1675 GACCTCGAGCGTAATCGTCTTTCCTGTCAGGGTCTTAACGAAAACCTGCAT 1625 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515175714259559