Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001264865.1_202015-08-11] 4,053 sequences; 15,232,490 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq1887 118 9e-22 seq1321 118 9e-22 seq1831 104 2e-17 >seq1887 Length=20729 Score = 118 bits (130), Expect = 9e-22 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||| | || || || || || || |||||| | || || || ||||||||| ||||| Sbjct 2081 ATGCAGGTGTTCGTCAAGACGCTCACTGGCAAGACGATCACGCTGGAAGTGGAATCGTCC 2140 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || ||||||| | || || || ||||| ||||| || || || || || || || Sbjct 2141 GATACGATTGAAAATGTGAAGGCCAAGATTCAGGACAAGGAGGGTATTCCCCCGGACCAG 2200 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| | || | |||||| || ||| |||||||| || || | ||| |||||| Sbjct 2201 CAGCGCCTGATCTTCGCCGGTAAGCAACTGGAAGACGGTCGTACTCTGAGCGACTACAAC 2260 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || ||||||||||| | || | || | ||| |||| ||||| || Sbjct 2261 ATCCAGAAGGAGTCGACGCTTCACCTCGTCCTTCGTCTGCGTGGTGGTAT 2310 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||| | || || || || || || || ||| | || || || ||||||||| ||||| Sbjct 2537 ATGCAGGTGTTCGTCAAGACACTCACTGGTAAGACGATCACGCTGGAAGTGGAATCGTCC 2596 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || |||| ||||| || ||||| ||||| || || || || || || || Sbjct 2597 GACACTATCGAGAACGTCAAGGCCAAGATTCAGGACAAGGAGGGTATTCCCCCGGACCAG 2656 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| | || | |||||| || ||| |||||||| || || | ||| |||||| Sbjct 2657 CAGCGCCTGATCTTCGCCGGTAAGCAACTGGAAGACGGTCGTACTCTGAGCGACTACAAC 2716 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 || || ||||||||||| | || | || | ||| |||| ||||| Sbjct 2717 ATCCAGAAGGAGTCGACGCTTCACCTCGTCCTCCGTCTGCGTGGTGG 2763 >seq1321 Length=24366 Score = 118 bits (130), Expect = 9e-22 Identities = 145/198 (73%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||| | || ||||| |||||||| || ||| | || || || ||||| || |||| Sbjct 277 CATGCAGGTTTTCGTAAAGACTCTGACAGGAAAGACGATCACACTCGAAGTCGAGTCGTC 218 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 |||| |||| |||| ||||| ||| || |||||||| || ||||| || || || || Sbjct 217 CGACACGATCGAGAACGTCAAGGCAAAGATCCAAGACAAGGAGGGCATTCCTCCGGACCA 158 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 ||||||| | || | || ||||| || | || || | ||| | ||| ||||| Sbjct 157 ACAGCGTCTGATCTTTGCGGGCAAGCAGCTCGAGGATGGCCGTACCCTGAGCGACTACAA 98 Query 27167 CATTCAAAAGGAGTCGAC 27184 ||| || ||||||||||| Sbjct 97 CATCCAGAAGGAGTCGAC 80 >seq1831 Length=21170 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| | || || || || || || |||||| | ||||| | ||||||||| |||| Sbjct 1 ATGCAAGTCTTCGTCAAGACCCTTACGGGCAAGACGATTACATTGGAAGTGGAATCGTCT 60 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | || || || |||||||| || || ||||| || || || ||| Sbjct 61 GACACCATTGAAAACGTGAAGGCGAAGATTCAAGATAAGGAGGGCATTCCTCCGGACCAA 120 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | || ||||| || | || || | ||| | ||| |||||| Sbjct 121 CAGCGTCTGATCTTTGCGGGCAAGCAGCTCGAGGATGGCCGTACCCTGAGCGACTACAAC 180 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || ||||||||||| | || ||||| | ||| | || ||||| || Sbjct 181 ATCCAGAAGGAGTCGACGCTTCACTTGGTCCTCCGTCTTCGTGGTGGTAT 230 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| | || || || || || || |||||| | ||||| || ||||| || | || Sbjct 229 ATGCAAGTCTTCGTCAAGACCCTTACGGGCAAGACGATTACGCTCGAAGTTGAGTCCTCG 288 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| |||| |||| ||||| || ||||| ||||| || ||||| || || || ||| Sbjct 289 GACACGATCGAGAACGTCAAGGCGAAGATTCAGGACAAGGAGGGCATTCCTCCGGACCAA 348 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | || ||||| || | || || | || | || |||||| Sbjct 349 CAGCGTCTGATCTTTGCTGGCAAGCAGCTTGAGGATGGCCGCACGCTCAGTGACTACAAC 408 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 ||||| ||||||||||| | || | || | ||| |||| ||||| Sbjct 409 ATTCAGAAGGAGTCGACGCTTCACCTCGTCCTCCGTCTGCGTGGTGG 455 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434896365946560