Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001264865.1_202015-08-11] 4,053 sequences; 15,232,490 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq3944 98.7 9e-16 >seq3944 Length=27584 Score = 98.7 bits (108), Expect = 9e-16 Identities = 309/482 (64%), Gaps = 35/482 (7%) Strand=Plus/Plus Query 6505 GGGGAACGGTCGGGGCTCTCGTTGCAGCTGGATCCGGAGCCGCTCGATGTGGTTCAGGTA 6564 |||||| ||||| ||||| || |||||| | | | | |||| || ||||| ||||| Sbjct 4240 GGGGAAGGGTCGCGGCTCGCGCATCAGCTGCTGCTGCAACGGCTCAATATGGTTGAGGTA 4299 Query 6565 GATATGCGCATCCCCCAACGTATGCACCAGCTCCCCAGGAACCAACCCCACGACATGAGC 6624 | || || || |||| | || | || | | | | ||| ||||| || Sbjct 4300 TACGTGAGCGTCACCCATGGCCAGCGTGAATTCGGCCGCTTCGCATCCCGTCACATGTGC 4359 Query 6625 GATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAACCCCATGTC 6684 ||| | || ||||| || || ||||| ||||||||||| ||||| || ||||||| || Sbjct 4360 GATGAGGTGGGTGAGTAGCGCATAACTTGCAATGTTGAAGGGCACGCCCAACCCCAGATC 4419 Query 6685 TCCCGATCGTTGATAGAGCTGGCAGGACAGCTCC----------CCA------------- 6721 | ||| || || || | |||||| || |||| | ||| Sbjct 4420 GCACGAGCGCTGGTACATCTGGCATGAGAGCTGCGGCTTGCGTCCCACCGCCGCCTCTTC 4479 Query 6722 ----TTCGC------GACGTAGAATTGGCAGAGGGTGTGGCACGGGGGGAGCGCCATCAG 6771 |||| ||| |||||||||| | | | || || || || | ||||| || Sbjct 4480 AGGGTTCGGCAGGGTGACAAAGAATTGGCACAAGATATGACAGGGTGGCAATGCCATGAG 4539 Query 6772 AGGGAGATCCTTCGGGTTCCACGCGCACATCACGATCCTTCTGTCATCAGGGTTCCGCTT 6831 || || || |||||||| ||| | | ||| || | | |||| |||||| ||| Sbjct 4540 CGGTAGGTCAGGTGGGTTCCATGCGGAGAGCACAATGCGGCGGTCAGTGGGGTTCGTCTT 4599 Query 6832 CAAGGTGTCGATCACGTACTGCAGCTGGTCCGCTCCCTGTCCCGAATAGTCCGCTTCG-C 6890 | | || || | ||||||||| | ||||| |||| |||||| | ||| | Sbjct 4600 GATTTGATGAATGACCTGTGCCAGCTGGTCTACACCCTGCCCCGTATAGTCGGTGTCGGC 4659 Query 6891 TCCCCCGATACTCCGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGC 6950 | || |||| || |||||||| | ||| ||||| ||||| ||||| |||||||||| Sbjct 4660 GTCGACG-TACTGGGCGCCAAAGTGCCGCCATTGGAAGCCGTACACCGGTCCCAAGTCGC 4718 Query 6951 CC 6952 || Sbjct 4719 CC 4720 Score = 98.7 bits (108), Expect = 9e-16 Identities = 309/482 (64%), Gaps = 35/482 (7%) Strand=Plus/Minus Query 34393 GGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTATCGGGG 34452 |||||||||||| ||||| ||||| ||||| ||| | |||||||| || |||| || | Sbjct 4720 GGGCGACTTGGGACCGGTGTACGGCTTCCAATGGCGGCACTTTGGCGCCCAGTA-CGTCG 4662 Query 34453 GAG-CGAAGCGGACTATTCGGGACAGGGAGCGGACCAGCTGCAGTACGTGATCGACACCT 34511 | ||| | |||||| |||| ||||| | ||||||||| | || || | Sbjct 4661 ACGCCGACACCGACTATACGGGGCAGGGTGTAGACCAGCTGGCACAGGTCATTCATCAAA 4602 Query 34512 TGAAGCGGAACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCCGAAGGATCTCC 34571 | ||| |||||| |||| | | || ||| | | ||| |||||||| || || | Sbjct 4601 TCAAGACGAACCCCACTGACCGCCGCATTGTGCTCTCCGCATGGAACCCACCTGACCTAC 4542 Query 34572 CTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTC------GCGAA-- 34623 | || ||||| | || || || || | | | |||||||||| ||| |||| Sbjct 4541 CGCTCATGGCATTGCCACCCTGTCATATCTTGTGCCAATTCTTTGTCACCCTGCCGAACC 4482 Query 34624 ---------------TGG----------GGAGCTGTCCTGCCAGCTCTATCAACGATCGG 34658 ||| | |||| || |||||| | || || || ||| Sbjct 4481 CTGAAGAGGCGGCGGTGGGACGCAAGCCGCAGCTCTCATGCCAGATGTACCAGCGCTCGT 4422 Query 34659 GAGACATGGGGTTAGGGGTGCCGTTCAACATTGCTAGTTACGCTCTGCTCACGTACATGA 34718 | || ||||||| || ||||| ||||||||||| ||||| || || ||||| || | | Sbjct 4421 GCGATCTGGGGTTGGGCGTGCCCTTCAACATTGCAAGTTATGCGCTACTCACCCACCTCA 4362 Query 34719 TCGCTCATGTCGTGGGGTTGGTTCCTGGGGAGCTGGTGCATACGTTGGGGGATGCGCATA 34778 |||| ||||| ||| | | | | || | || | |||| || || || Sbjct 4361 TCGCACATGTGACGGGATGCGAAGCGGCCGAATTCACGCTGGCCATGGGTGACGCTCACG 4302 Query 34779 TCTACCTGAACCACATCGAGCGGCTCCGGATCCAGCTGCAACGAGAGCCCCGACCGTTCC 34838 | ||||| ||||| || |||| | | | | |||||| || ||||| ||||| |||| Sbjct 4301 TATACCTCAACCATATTGAGCCGTTGCAGCAGCAGCTGATGCGCGAGCCGCGACCCTTCC 4242 Query 34839 CC 34840 || Sbjct 4241 CC 4240 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448239689906160