Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001264865.1_202015-08-11] 4,053 sequences; 15,232,490 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq1186 107 2e-18 seq1579 104 2e-17 seq1887 87.8 2e-12 >seq1186 Length=2681 Score = 107 bits (118), Expect = 2e-18 Identities = 152/211 (72%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 39075 CACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATC 39134 ||||| || ||||| ||| || || || || || ||| || || || |||| || Sbjct 2490 CACCAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTGAGCGTGCGGCCGTCCTC 2431 Query 39135 AAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCAT 39194 ||||| ||||||||||| || || ||||||||||| | ||| | | ||| |||||| Sbjct 2430 GAGCTGCTTGCCCGCAAAGATGAGCCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTG 2371 Query 39195 GATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTT 39253 || || |||| || || | | ||| ||||||||||| || || | |||||| | | Sbjct 2370 GACCTTGGACTTGA-CGACGTCGATCGTGTCGCTCGACTCGACCTCGAGCGTGATCGTCT 2312 Query 39254 TTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 | ||||| ||||| || | ||||||||||| Sbjct 2311 TGCCCGTGAGCGTCTTGATGAAGATTTGCAT 2281 >seq1579 Length=1639 Score = 104 bits (114), Expect = 2e-17 Identities = 147/204 (72%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || ||||| ||| || || || || || ||| || || || |||| || ||||| Sbjct 1445 TGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTGAGCGTGCGGCCGTCTTCGAGCTGC 1386 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 ||||||||||| || || ||||| ||||| | ||| | || ||| |||||| || || Sbjct 1385 TTGCCCGCAAAGATCAGGCGCTGTTGGTCCGGGGGGATGCCCTCCTTGTCCTGGACCTTG 1326 Query 39202 TGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGT 39260 |||| || || | | ||| ||||||||||| || || | |||||| | || ||||| Sbjct 1325 GACTTGA-CGACGTCGATCGTGTCGCTCGACTCGACCTCGAGCGTGATCGTCTTGCCCGT 1267 Query 39261 CAGCGTTTTAACAAAGATTTGCAT 39284 ||||| || | ||||||||||| Sbjct 1266 GAGCGTCTTGATGAAGATTTGCAT 1243 >seq1887 Length=20729 Score = 87.8 bits (96), Expect = 2e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 39094 TCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAAT 39153 || || || || || || ||| || || || || || |||||||| ||||| || || Sbjct 1815 TCCTTCTGGATGTTGTAGTCGCTCAGCGTACGGTCATCCTCAAGCTGCTTGCCAGCGAAG 1756 Query 39154 ATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTC 39213 ||||| ||||||||||| | ||| | | ||| |||||| ||| || |||| || Sbjct 1755 ATAAGGCGCTGCTGGTCCGGGGGAATACCCTCCTTGTCCTGGATCTTGGCCTTGACGTTC 1696 Query 39214 GCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACA 39273 | | ||| ||| |||||| || || | ||| || | ||||| ||||| || ||||| Sbjct 1695 TCGATCGTGTCGGACGACTCGACCTCGAGCGTAATCGTCTTTCCTGTCAGGGTCTTAACG 1636 Query 39274 AAGATTTGCAT 39284 || | ||||| Sbjct 1635 AAAACCTGCAT 1625 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429524382192389