Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001264865.1_202015-08-11] 4,053 sequences; 15,232,490 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq1887 104 2e-17 seq1831 98.7 7e-16 >seq1887 Length=20729 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||| | ||||| || || ||||| || || |||||||| || ||||| || || | Sbjct 2081 ATGCAGGTGTTCGTCAAGACGCTCACTGGCAAGACGATCACGCTGGAAGTGGAATCGTCC 2140 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 || || |||||| | || || ||| ||||| || ||| | || || || || Sbjct 2141 GATACGATTGAAAATGTGAAGGCCAAGATTCAGGACAAGGAGGGTATTCCCCCGGACCAG 2200 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||||| | || || ||||| || ||||||||||||| || ||| | |||| |||||| Sbjct 2201 CAGCGCCTGATCTTCGCCGGTAAGCAACTGGAAGACGGTCGTACTCTGAGCGACTACAAC 2260 Query 23791 ATACAAAAAGAGTCCAC 23807 || || || ||||| || Sbjct 2261 ATCCAGAAGGAGTCGAC 2277 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||| | ||||| || || ||||| || || |||||||| || ||||| || || | Sbjct 2537 ATGCAGGTGTTCGTCAAGACACTCACTGGTAAGACGATCACGCTGGAAGTGGAATCGTCC 2596 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 |||||| | || | | || || ||| ||||| || ||| | || || || || Sbjct 2597 GACACTATCGAGAACGTCAAGGCCAAGATTCAGGACAAGGAGGGTATTCCCCCGGACCAG 2656 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||||| | || || ||||| || ||||||||||||| || ||| | |||| |||||| Sbjct 2657 CAGCGCCTGATCTTCGCCGGTAAGCAACTGGAAGACGGTCGTACTCTGAGCGACTACAAC 2716 Query 23791 ATACAAAAAGAGTCCAC 23807 || || || ||||| || Sbjct 2717 ATCCAGAAGGAGTCGAC 2733 >seq1831 Length=21170 Score = 98.7 bits (108), Expect = 7e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| | ||||| || ||||| ||||| || ||||| || ||||||||||| ||| || Sbjct 229 ATGCAAGTCTTCGTCAAGACCCTTACGGGCAAGACGATTACGCTCGAAGTTGAGTCCTCG 288 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| | || | | || || ||| ||||| || || | || || || ||| Sbjct 289 GACACGATCGAGAACGTCAAGGCGAAGATTCAGGACAAGGAGGGCATTCCTCCGGACCAA 348 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 |||||| | || ||||| ||||| || || || || | ||||| | | || |||||| Sbjct 349 CAGCGTCTGATCTTTGCTGGCAAGCAGCTTGAGGATGGCCGCACGCTCAGTGACTACAAC 408 Query 23791 ATACAAAAAGAGTCCAC 23807 || || || ||||| || Sbjct 409 ATTCAGAAGGAGTCGAC 425 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 337992903698924