Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001264875.1_202015-08-11] 3,262 sequences; 13,707,196 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq1246 118 2e-21 seq3012 107 4e-18 seq2815 93.3 9e-14 seq1245 91.5 3e-13 >seq1246 Length=1421 Score = 118 bits (130), Expect = 2e-21 Identities = 354/542 (65%), Gaps = 12/542 (2%) Strand=Plus/Minus Query 319401 CTTCACGAACTCGGACAGATTTCCCTTGTACTTCTTCAGCTTTAGGTTAGGTTCGTAATG 319460 |||||||||| | ||| || ||| ||| ||| | ||| | | ||||| | || Sbjct 537 CTTCACGAACGCATCCAGGTTGCCCGGGTAACGCTTGATCTTGAAGC--GGTTCA-AGTG 481 Query 319461 GATAATAGAGGTGCAAACAGCGTCGAGGAACCCGGAGTCGTGTGACACAATCACGCACGA 319520 || ||| ||| || || ||| ||||||| ||||||||| || ||||| | ||| Sbjct 480 GAGAATGTCGGTACACACGTCGTTGAGGAACTTGGAGTCGTGCGAGACAATGATCGACGT 421 Query 319521 AACGTCCTTAAGGTTGATCAGGTATTCAATCAACCACCTCACGTTAGACACAGAAAGATG 319580 || | || || | ||||| || | | |||| | ||||| |||| | || Sbjct 420 GGTCTCGGTGAGACTGTTGAGGTAGTCCGTGATCCACTTGACGTTGATCACATCCAAGTG 361 Query 319581 GTTGGTCGGCTCGTCAAGAAGCAGTAGCTTTGCGTTCAGGAGCATTGCACGTGCAAGAGC 319640 ||| |||||||||||||| || || | | || || | |||| ||||| || || || Sbjct 360 GTTCGTCGGCTCGTCAAGCAGAAGAATGTCGGCCTTGAACAGCACCGCACGCGCCAGGGC 301 Query 319641 GAGTTTCATTTTCCACCCTCCGGAAAGAGTGTTAATTGGGGCAGATTGGCGCTCAATATC 319700 ||| ||||| ||||| || || || || | |||| || ||| ||||||| ||| Sbjct 300 GAGCTTCATCTTCCAGCCACCCGAGAGCGCCGTAATGGGACCAGCCTGGCGCTGCTCATC 241 Query 319701 AAAGCCAACCGATTCTAGAGTAGTTACGATCTTTTCACGAGACCAAATGTTTTCCTTTAC 319760 ||||| | | | || ||| || |||| | | | || | || | Sbjct 240 GAAGCCCATC--TCCTTGAG------CG-TCTTGGCCGCCGTCTCGTGGTCGACGTTCAG 190 Query 319761 TTGTTCATCATTGGCAATGAAGTCAATGATAGCCGTGTTAGAATCGGACCCGTCGAGATC 319820 | | || | | |||||||| || || | ||| | || || |||||||| || Sbjct 189 GCGCTTGTCGGCGACGATGAAGTCGATAATGGAAATGTCACCCTCCGAGCCGTCGAGGTC 130 Query 319821 GTGTTCCACGTAAGCAGTTTTCAAAACATCCGCAGAGGGGAACCCTTCAAGCTGGCCGTT 319880 ||| || ||||| || || | || | |||||||| || |||| ||| ||||| Sbjct 129 GTGCTCGACGTACCAGGTGCGCACCTCGTCGGGCGAGGGGAAGCCCTCAACCTGACCGTT 70 Query 319881 CACAATAGCGCGCATCAGGGTTGATTTACCCGCCCCGTTTGGCCCACACAGACCGTAGCG 319940 | || ||||||||||| || || ||||||| ||||| | ||||||||||||||||| Sbjct 69 CTGGATGGCGCGCATCAGCGTCGACTTACCCGAACCGTTGCGGCCACACAGACCGTAGCG 10 Query 319941 GT 319942 || Sbjct 9 GT 8 >seq3012 Length=3775 Score = 107 bits (118), Expect = 4e-18 Identities = 251/368 (68%), Gaps = 12/368 (3%) Strand=Plus/Plus Query 230239 ATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCT--AACGAGTTCA 230296 ||||| |||||| ||| ||| ||||||| ||||| ||| ||| |||||| ||| Sbjct 3189 ATCTTCTGGCTGAAGAAGCGCGGTCTGATGCCCGGCCT--GTCGTTCTCGAACGAGCTCA 3246 Query 230297 TCAGTCGCGACGAGGGTCTCCATCAACAGTTCGGCGAGCTTA-TGTATTCAAAGCTCCAG 230355 || || ||||||||||| || || | | ||| || | ||| | | ||| || Sbjct 3247 TCTCGCGTGACGAGGGTCTGCA-CACCGACTTTGCGTGCCTGCTGTTTGGCCACCTCAAG 3305 Query 230356 AA-CAAGCT-ACCATTCGAGACGGTCAAACAAATCATTACAGAAGCAGTTGAAAACGAAA 230413 || | || ||| ||| ||||| || | |||||||| || || || | | || Sbjct 3306 AAGCGCGCGCACCC--CGACACGGTGAACCGCATCATTACCGAGGCGGTGGCGATTGAGC 3363 Query 230414 AGGAGTTCATTTGTGACGCTATTCCA-TGTCGCCTTATTGGCATGAACGCTGAACTTATG 230472 | || ||| ||| ||||| | || |||||| | ||||||||||| || || ||| Sbjct 3364 AAGACTTCCTTTCCGACGCGCTGCCCGTGTCGC-TGATTGGCATGAATGCGCGCCTGATG 3422 Query 230473 GGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGAAAGTG 230532 | |||||||| || || || || |||||| | | || || || || || ||| Sbjct 3423 TGCCAGTACATTGAGTTTGTGGCGGACCGCCTGCTCGTGGCGCTGGGCAACCCGAAGCAC 3482 Query 230533 TACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGACCAAC 230592 |||||| | | ||||||||| | ||||||||| |||||||| || || ||| | ||| Sbjct 3483 TACAACGCGACGAACCCCTTCGACTTTATGGAGAATATTTCGCTGCAGGGCAAGTCGAAC 3542 Query 230593 TTCTTCGA 230600 || ||||| Sbjct 3543 TTTTTCGA 3550 >seq2815 Length=5788 Score = 93.3 bits (102), Expect = 9e-14 Identities = 371/571 (65%), Gaps = 25/571 (4%) Strand=Plus/Plus Query 281742 GTGAAGATATACCTTGCACTCGCGTGGTCTTTACCACCC-TGCAGCCTCGACCCAAACTG 281800 |||||||| || | ||||| || ||| || || ||| || ||| || || ||||| Sbjct 1460 GTGAAGATGTAACGCGCACTGGCCGCGTCCTTGCCGCCCATGGAGCG-CGTACCGAACTG 1518 Query 281801 ACCCTCCGGCAACAACCAGTTAATGTTATTGCTCCCGACGTAATCCTGAGCCAGGTTGAC 281860 || | |||| | | ||| | ||| ||||||||| | | ||||| || ||| ||| Sbjct 1519 GCCGTTGGGCATGAGCATGTTGACGTTGTTGCTCCCGCAGAAGTCCTGCGCAAGGCCGAC 1578 Query 281861 GATTGTCCCCTGAAGCGATACCTCACCGTGGTGATAGGCGCTGTGTTCGGCAACATAACC 281920 ||| ||| | || || |||||||| |||||| |||| || || || || || Sbjct 1579 GATGGTCATCACCAGGCTCTGGTCGCCGTGGTGGTAGGCGGTGTGCTCCGCGACGTAGCC 1638 Query 281921 ACTGAA-CTG-TGCTACCTTCACGTCTGATGTCAAGTTGCGTTTGAAAGCGCAATATAAT 281978 ||| | ||| ||| ||||| | || | | | |||||| ||||| || | | | Sbjct 1639 -CTGCAGCTGCTGC-ACCTTGATTTCGGTCTTGAGGTTGCGCTTGAAGCAGCCAAACAGC 1696 Query 281979 ACTTTTCGTTGAGAAGGCTTGAAACCATCAACGACAGACGGAATGCTGCG----TTCCAG 282034 || || || || ||||| || || || || || ||||| ||| ||| || | Sbjct 1697 ACCTTGCGCTGCCCGGGCTTCAAGCCGTCGACCACCGACGGGATGGAGCGGATGTTGTCG 1756 Query 282035 GTCATACCGCGAGAACAAAATAAGTTCCTTGTCAATGAAGTCGGGAACGGGAACCTCGGG 282094 | ||| |||||| | || || ||||||| || ||||||| | ||| | || | | Sbjct 1757 GCCAT----CGAGAAGAGGATCAGCTCCTTGTTGATAAAGTCGGCGATGGGGATCTGGCG 1812 Query 282095 CTTCTTGTGGTCAAGTTGGTTTCCCGGCTCGTA-TGCCGTCATCCACTCCTTGCGATCCT 282153 | |||||| || | | | || ||| | | || || || |||||||||||| || | Sbjct 1813 GATGCGGTGGTCGAGGTAGGTGCCGGGCACAAACTGGCG-CAGCCACTCCTTGCGGTCGT 1871 Query 282154 CGGCCCGAGTCTTGTTGAAAGAACGATCGATGAGCTCTCCAGAATCAGAAGTCCACGT-- 282211 ||||| |||||||||| | | || | ||||| | | | || ||| Sbjct 1872 CGGCCTTCTTCTTGTTGAACGCGAGGTCCACAAGCTCGCGGTCGCCGGGCTTCATCGTCT 1931 Query 282212 -AAACGTCTTCATAAGAGTCTTCAGGTTGCTGAAGTAATGCT---TGGCATCAGTGCTGG 282267 |||| ||| | || | || ||||| |||||| | || || | || | ||| Sbjct 1932 CGAACGAGAGCATGTGCGTGTCCATGTTGCGGAAGTACTTCTTCATGTCCTCCGCCTTGG 1991 Query 282268 AACTCGTACCGAGACCCTTGTAATACTTGAT 282298 | |||||||||||||||||| |||||||| Sbjct 1992 A---CGTACCGAGACCCTTGTAGTACTTGAT 2019 >seq1245 Length=1421 Score = 91.5 bits (100), Expect = 3e-13 Identities = 348/542 (64%), Gaps = 12/542 (2%) Strand=Plus/Minus Query 319401 CTTCACGAACTCGGACAGATTTCCCTTGTACTTCTTCAGCTTTAGGTTAGGTTCGTAATG 319460 |||||||||| || ||| || ||| ||| ||| | ||| | | ||||| || Sbjct 537 CTTCACGAACGCGTCCAGGTTGCCCGGGTAGCGCTTGATCTTGAAGC--GGTTCAGG-TG 481 Query 319461 GATAATAGAGGTGCAAACAGCGTCGAGGAACCCGGAGTCGTGTGACACAATCACGCACGA 319520 || ||| ||| || || ||| |||||| ||||||||| |||||||| | ||| Sbjct 480 GAGAATGTCGGTACACACGTCGTTCAGGAACTTGGAGTCGTGCGACACAATGATCGACGT 421 Query 319521 AACGTCCTTAAGGTTGATCAGGTATTCAATCAACCACCTCACGTTAGACACAGAAAGATG 319580 || | ||| || | ||||| || | | |||| | ||||| || | || Sbjct 420 GGTCTCGGTGAGGCTGTTGAGGTAGTCGGTGATCCACTTGACGTTGATGACGTCCAAGTG 361 Query 319581 GTTGGTCGGCTCGTCAAGAAGCAGTAGCTTTGCGTTCAGGAGCATTGCACGTGCAAGAGC 319640 ||| ||||||||||| || ||||| | | || || | |||| ||||| || || || Sbjct 360 GTTCGTCGGCTCGTCGAGCAGCAGAATGTCGGCCTTGAACAGCACGGCACGCGCCAGGGC 301 Query 319641 GAGTTTCATTTTCCACCCTCCGGAAAGAGTGTTAATTGGGGCAGATTGGCGCTCAATATC 319700 ||| ||||| ||||| || || || || | | || || ||| ||||||| || Sbjct 300 GAGCTTCATCTTCCAGCCACCCGAGAGCGCCGTGATGGGACCAGCCTGGCGCTGCTCGTC 241 Query 319701 AAAGCCAACCGATTCTAGAGTAGTTACGATCTTTTCACGAGACCAAATGTTTTCCTTTAC 319760 || || | | | || ||| || |||| | | | || | || | Sbjct 240 GAAACCCATC--TCCTTGAG------CG-TCTTGGCCGCCGTCTCGTGGTCGACGTTCAG 190 Query 319761 TTGTTCATCATTGGCAATGAAGTCAATGATAGCCGTGTTAGAATCGGACCCGTCGAGATC 319820 | | || | | |||||||| | || | ||| | || || |||||||| || Sbjct 189 GCGCTTGTCGGCGACGATGAAGTCGAGAATGGAAATGTCACCCTCCGAGCCGTCGAGGTC 130 Query 319821 GTGTTCCACGTAAGCAGTTTTCAAAACATCCGCAGAGGGGAACCCTTCAAGCTGGCCGTT 319880 ||| || ||||| || || | || | |||||||| || || | ||||||||| Sbjct 129 GTGCTCGACGTACCAGGTGCGCACCTCGTCGGGCGAGGGGAAGCCCTCGACCTGGCCGTT 70 Query 319881 CACAATAGCGCGCATCAGGGTTGATTTACCCGCCCCGTTTGGCCCACACAGACCGTAGCG 319940 | || ||||||||||| || || || |||| ||||| | ||||||||||||||||| Sbjct 69 CTGGATGGCGCGCATCAGCGTCGACTTGCCCGAACCGTTGCGGCCACACAGACCGTAGCG 10 Query 319941 GT 319942 || Sbjct 9 GT 8 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057779788907060