Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001264875.1_202015-08-11] 3,262 sequences; 13,707,196 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq2836 104 2e-17 seq1001 104 2e-17 seq974 89.7 3e-13 seq881 89.7 3e-13 seq877 84.2 1e-11 >seq2836 Length=5357 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || ||||| | || || ||||| | || || ||||| |||||||||||| | Sbjct 2643 CCACCACGCAGACGAAGGACGAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTC 2702 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| |||| |||| ||||| || ||||| || || ||||||||||| ||| Sbjct 2703 AGAGTACGACCGTCTTCCAGTTGCTTACCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGA 2762 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || ||||||||| ||||| ||| | | | || | |||| |||||| || Sbjct 2763 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCGATAGTGTCGGACGATTCCACT 2822 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||| |||||| || || || ||||| || || || || | |||||| Sbjct 2823 TCCAGCGTGATCGTCTTACCAGTGAGTGTCTTGACGAACACCTGCAT 2869 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || ||||| | || || ||||| | || || ||||| ||||||||||| | Sbjct 3099 CCACCACGCAGGCGGAGGACGAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCACTC 3158 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 ||| ||| | || || | ||||||||| ||||| || || ||||| ||||| || Sbjct 3159 AGCGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATAAGGCGCTGTTGGTCCGGAGGA 3218 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | | ||||||||| ||||| ||| | || | |||| ||||| |||||| || Sbjct 3219 ATACCCTCCTTGTCCTGAATCTTGGCCTTCACATTTTCAATCGTATCGGACGATTCCACT 3278 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||| |||||| || || || ||||| || || || || | |||||| Sbjct 3279 TCCAGCGTGATCGTCTTACCAGTGAGCGTCTTGACGAACACCTGCAT 3325 Score = 95.1 bits (104), Expect = 8e-15 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || ||||| || | || || ||||| | || ||| ||||| |||||||||||| Sbjct 2871 CCACCGCGGAGGCGGAGAACGAGGTGAAGCGTCGATTCCTTCTGGATGTTGTAGTCGCTA 2930 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 ||| ||| | || || | ||||||||| || || || || ||||| ||||| ||| Sbjct 2931 AGCGTGCGGCCATCCTCAAGCTGCTTGCCGGCAAAGATCAGGCGCTGTTGGTCCGGGGGA 2990 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | | ||||||||| ||||| ||| | || | |||| || | || ||||| Sbjct 2991 ATACCCTCCTTGTCCTGAATCTTAGCCTTAACATTCTCGATCGTGTCCGAAGACTCGACC 3050 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | |||||| || ||||| || ||||| || || || | |||||| Sbjct 3051 TCGAGCGTGATAGTCTTGCCCGTAAGAGTCTTGACGAACACCTGCAT 3097 Score = 89.7 bits (98), Expect = 3e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || ||||| | || || ||||| | || || ||||| |||||||||||| Sbjct 2415 CCACCACGCAGACGGAGGACGAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTA 2474 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 ||| ||| | || || | ||||||||| || || || || ||||| ||||| ||| Sbjct 2475 AGCGTGCGGCCATCCTCAAGCTGCTTGCCAGCAAAGATCAGGCGCTGTTGGTCCGGGGGA 2534 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || ||||||||| ||||| ||| | | | |||| || | || ||||| Sbjct 2535 ATGCCCTCCTTGTCCTGGATCTTCGCCTTGACGTTCTCGATCGTGTCCGAAGACTCGACC 2594 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | |||||| || ||||| || ||||| || || || | |||||| Sbjct 2595 TCGAGCGTGATAGTCTTGCCCGTAAGAGTCTTGACGAACACCTGCAT 2641 Score = 86.0 bits (94), Expect = 4e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || ||||| || | || || ||||| | || ||| ||||| |||||||||||| Sbjct 3327 CCACCGCGGAGGCGGAGAACGAGGTGAAGCGTCGATTCCTTCTGGATGTTGTAGTCGCTA 3386 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 ||| |||| | || || | |||||||| || || || || ||||||||||| ||| Sbjct 3387 AGCGTACGGCCATCCTCAAGTTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCCGGGGGA 3446 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | | ||||||||| ||||| ||| | | | |||| || | || ||||| Sbjct 3447 ATACCCTCCTTGTCCTGGATCTTAGCCTTCACGTTCTCGATCGTGTCCGAGGACTCGACC 3506 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTT 34374 || | |||||| || ||||| || ||||| || Sbjct 3507 TCGAGCGTGATAGTCTTGCCCGTAAGAGTCTT 3538 >seq1001 Length=1754 Score = 104 bits (114), Expect = 2e-17 Identities = 152/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 ||||| ||||| | || || ||||| |||||||||||| ||| ||| |||| Sbjct 288 AGCACAAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTGAGCGTGCGGCCGTCT 347 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 || | ||||||||| || || || || ||||| ||||| ||| | || ||||||||| Sbjct 348 TCGAGCTGCTTGCCCGCAAAGATCAGGCGCTGTTGGTCCGGGGGGATGCCCTCCTTGTCC 407 Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357 | ||| ||| | || | |||| ||| |||| ||||| || | |||||| || Sbjct 408 TGGACCTTGGACTTGACGACGTCGATCGTGTCGCTCGACTCGACCTCGAGCGTGATCGTC 467 Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCATCGC 34392 ||||| ||||| || || | ||||| ||||| || Sbjct 468 TTGCCCGTGAGCGTCTTGATGAAGATTTGCATGGC 502 >seq974 Length=24368 Score = 89.7 bits (98), Expect = 3e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || ||||| || | || || ||||| | || || ||||| ||||||||||| | Sbjct 82 CCACCGCGGAGGCGGAGGACGAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCACTC 141 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| | || || | |||||||||||| || || || ||||| ||||| ||| Sbjct 142 AGAGTACGACCATCCTCGAGCTGCTTGCCTGCAAAGATAAGGCGCTGTTGGTCCGGGGGA 201 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | | ||||||||| |||||| ||| | | | |||| |||| ||| ||||| Sbjct 202 ATACCCTCCTTGTCTTGGATCTTTGCCTTGACGTTCTCGATCGTGTCGGACGACTCGACT 261 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | ||||| || || || || ||||| || || || | |||||| Sbjct 262 TCGAGTGTGATCGTCTTTCCTGTCAGAGTCTTTACGAAAACCTGCAT 308 >seq881 Length=2154 Score = 89.7 bits (98), Expect = 3e-13 Identities = 109/145 (75%), Gaps = 3/145 (2%) Strand=Plus/Plus Query 34153 TTCGTCGAATCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTT 34212 ||| ||| | ||||||||||| | ||| || ||||| | || || ||||| ||||| Sbjct 1811 TTCTTCGCA-CCGCCGCGCAGGCGCAGGACGAGGTGCAGCGTCGACTCCTTCTGGATGTT 1869 Query 34213 GTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTG 34272 ||||||| |||| || |||| || | ||||||||| || || ||||| |||||||| Sbjct 1870 GTAGTCGCTCAGCGTGCGCCCGTCCTCGAGCTGCTTGCCGGCAAAGATGAGACGCTGCTG 1929 Query 34273 GT-CGACGGGCACGCTCTCCTTGTC 34296 || || |||| | || |||||| || Sbjct 1930 GTCCGGCGGG-ATGCCCTCCTTATC 1953 >seq877 Length=2157 Score = 84.2 bits (92), Expect = 1e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 ||||||||||| | || || || || | ||| || ||||| |||||||||||| | Sbjct 1827 CCGCCGCGCAGGCGCAAAACGAGATGCAGCGTAGACTCCTTCTGGATGTTGTAGTCGCTC 1886 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 ||| || |||| || | ||||||||| || || ||||| |||||||| ||| || Sbjct 1887 AGCGTGCGCCCGTCCTCGAGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGATCGGGCGGA 1946 Query 34283 ACGCTCTCCTTGTC 34296 | || ||||||||| Sbjct 1947 ATGCCCTCCTTGTC 1960 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323059156070720