Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001264875.1_202015-08-11] 3,262 sequences; 13,707,196 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq2854 161 2e-34 seq1048 113 1e-19 seq1294 98.7 2e-15 seq2576 86.0 1e-11 >seq2854 Length=5262 Score = 161 bits (178), Expect = 2e-34 Identities = 440/669 (66%), Gaps = 15/669 (2%) Strand=Plus/Minus Query 248833 TTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATTGATGGCAAGATCGTGGAACGAATT 248892 ||||| ||||| ||| ||||| || || || | |||||| ||| || || Sbjct 4308 TTCAAGACGCTTGAGCGCTCGTACCTGCTGCGCATCAACGGCAAGGTCGCCGAGCGCCCC 4249 Query 248893 CAGCACATGTTGATGCGAGTGGCTGTCGGGATTCACAAGGATGACATAGAGAGCGTGCTC 248952 ||||||||| | ||||| ||||| || || || ||| ||| | ||||||| | || Sbjct 4248 CAGCACATGCTCATGCGTGTGGCGGTGGGCATCCACGGCACCGACGTCGAGAGCGCGATC 4189 Query 248953 GAGACGTACACCGGAATGA--GTGAACGCTGGATGACACATGCCACACCGACGCTCTTCA 249010 |||||||||| | ||| | ||| || | || || ||| | ||||||||||||| Sbjct 4188 GAGACGTACAACATGATGTCGGAGAAGGCCT--TTACGCACGCCTCGCCGACGCTCTTCA 4131 Query 249011 ACGCCGGTACCGTCAACAATCAGCTGAGCTCGTGCTTTCTTCTTGCCATGCAAGACGACT 249070 |||| || || | | ||| || |||||||| || | |||| | ||||||| Sbjct 4130 ACGCGGGCACGCCGAGCCCGCAGATGTCGTCGTGCTTCCTGGTGTGCATGAAGGACGACT 4071 Query 249071 CTGTCGACGGCATTTATGACACGCTTAAACAGACGGCGAAGATTTCTAAATTCGCGGGCG 249130 | |||| ||||| || |||||||| || | |||| ||| || || ||||||| Sbjct 4070 CGATCGAGGGCATCTACGACACGCTCAAGTCGTGTGCGATGATCTCCAAGACGGCGGGCG 4011 Query 249131 GAATCGGTCTCTCCGTCTCCAACATCCGAGCGAAGGGTTCGTACATCAAAGGTACAAATG 249190 | || |||||| | || | |||||| | | ||| |||||||| || || || | Sbjct 4010 GCATTGGTCTCAACATCCACTGCATCCGCGGCACGGGCTCGTACATTGCCGGCACGAACG 3951 Query 249191 GGGTCAGTGATGGTATCGTACCCCTCCTTCGATGCTTTGAGTCCACCGCCAGGTTCATCA 249250 | || || | || || || ||| | || || | | ||| || | | | || Sbjct 3950 GTGTGAGCAACGGCATTGTGCCCATGCTCCGCGTGTACAACAACACGGCGCGCTACGTCG 3891 Query 249251 ACCAGGCCGG------GCGCCGAAAGGGGTCGTTCGCCATGTATTTGGAAGTGTGGCACG 249304 |||||| || ||||| || | || ||||| || | || ||||||| Sbjct 3890 ACCAGGGTGGCAACAAGCGCC---CCGGCGCCTTTGCCATCTACCTCGAGCCGTGGCACT 3834 Query 249305 CCGATATATTGGAGTTCCTGGACTTGAAAAAGAACAACGGCAACGAGCTCATGAGAGCGC 249364 | || | || ||||| | ||| || |||||| ||||||| || || | |||| Sbjct 3833 CGGACGTGTTTGAGTTTATCGACCTGCGCAAGAACCACGGCAAGGAAGAGGTGCGCGCGC 3774 Query 249365 GTGACCTCTTCTACGGCCTGTGGGTCTCCGACTTGTTCATGCGCCGCGTCAAGGCCGACG 249424 | ||||| ||||||| |||||||| | ||| |||| |||||||| ||| || | || Sbjct 3773 GCGACCTGTTCTACGCGCTGTGGGTGCCGGACCTGTTTATGCGCCGTGTCGAGCAGGGCG 3714 Query 249425 GCGATTGGACGCTTCTTTCTCCGTCCGACGCCCCGGACCTCATCGATCTAC-ACGGCGCC 249483 |||| |||||||| | | || |||| || || | |||| ||| || | |||||| Sbjct 3713 GCGACTGGACGCTGATGTGCCCCGCCGAGGCGCCCGGCCTCGCCGA-CTGCTACGGCGAG 3655 Query 249484 GACTTCGAC 249492 || || ||| Sbjct 3654 GAGTTTGAC 3646 >seq1048 Length=1767 Score = 113 bits (124), Expect = 1e-19 Identities = 189/266 (71%), Gaps = 8/266 (3%) Strand=Plus/Plus Query 254011 TGCTTTTCCACGGTCCTCCCGGAACAGGCAAGACGTCAACCATCCTGGCGCTGGCCCGAA 254070 |||| ||| |||| || ||||| || ||||||||||| || ||| ||||||| || || Sbjct 228 TGCTGTTCTACGGCCCGCCCGGCACGGGCAAGACGTCGACGATCATGGCGCTCGCGCGCC 287 Query 254071 CCCTGTTGGGCGAGGGGAACATGAGAGAGCGCGTGCTCGAGCTGAACGCTTCTGACGAAC 254130 |||| ||| || | || || | | |||||||||||||||||| || ||||| | Sbjct 288 GGCTGTACGGCAAGCAGTTCAAGA---ACCACGTGCTCGAGCTGAACGCGTCCGACGACC 344 Query 254131 GCGGGTTGGACGTCGTCCGCGACAAGATCAAGACTTTCTCCAAGATGTCGATTTCGTCGT 254190 |||| | |||||||| |||| |||||||| | ||| | | | | || ||| || Sbjct 345 GCGGCATCGACGTCGTGCGCGGGCAGATCAAGTCGTTCGCGAGCACG-CG-CAACGT-GT 401 Query 254191 TC-CAACCCGGCTGTCCGCCTTTCAAGCTCGTGATCCTGGACGAGGCGGACACCATGACG 254249 || || | || | | | |||||||| | | || |||||||| ||| |||||||| Sbjct 402 TCAGCACGCAGCAGGAC-ACGTTCAAGCTGATCGTGCTCGACGAGGCCGACGCCATGACG 460 Query 254250 GCCGACGCGCAGTCCGCCCTCCGCCG 254275 | ||||||| |||| ||||| || Sbjct 461 CAGGCCGCGCAGGCCGCGCTCCGGCG 486 >seq1294 Length=1346 Score = 98.7 bits (108), Expect = 2e-15 Identities = 233/341 (68%), Gaps = 12/341 (4%) Strand=Plus/Plus Query 254011 TGCTTTTCCACGGTCCTCCCGGAACAGGCAAGACGTCAACCATCCTGGCGCTGGCCCGAA 254070 |||| ||| |||| || || || || ||||||||||| || ||| ||||||| || || Sbjct 279 TGCTCTTCTACGGCCCGCCGGGCACGGGCAAGACGTCGACGATCATGGCGCTCGCGCGCC 338 Query 254071 CCCTGTTGGGCGAGGGGAACATGAGAGAGCGCGTGCTCGAGCTGAACGCTTCTGACGAAC 254130 |||| || || | || || | | |||||| ||||||||||| || ||||| | Sbjct 339 GGCTGTACGGGAAGCAGTTCAAGA---ACCACGTGCTGGAGCTGAACGCGTCCGACGACC 395 Query 254131 GCGGGTTGGACGTCGTCCGCGACAAGATCAAGACTTTCTCCAAGATGTCGATTTCGTCGT 254190 |||| | |||||||| |||| |||||||| | ||| | | | | || ||| || Sbjct 396 GCGGCATCGACGTCGTGCGCGGGCAGATCAAGTCGTTCGCGAGCACG-CG-CAACGT-GT 452 Query 254191 TC-CAACCCGGCTGTCCGCCTTTCAAGCTCGTGATCCTGGACGAGGCGGACACCATGACG 254249 || || | || | | | |||||||| | | || |||||||||||| |||||||| Sbjct 453 TCAGCACGCAGCAGGAC-ACGTTCAAGCTGATCGTGCTCGACGAGGCGGACGCCATGACG 511 Query 254250 GCCGACGCGCAGTCCGCCCTCCGCCGAACGATGGAGACGCACTCCGTTGTGAC--GCGTT 254307 | |||||| | || ||||| || ||| ||| | || || | || ||| | Sbjct 512 CAGGCGGCGCAGGCGGCGCTCCGGCGCGTGATCGAGCAGTAC-ACGAAG-AACGTGCGCT 569 Query 254308 TTTGCCTGGTGTGCAACTACGTGTCGAAGATCATCGCCCCG 254348 | ||| | | ||||||||||| ||||||||| || || Sbjct 570 TCTGCATCATCTGCAACTACGTCAACAAGATCATCCCCGCG 610 >seq2576 Length=37491 Score = 86.0 bits (94), Expect = 1e-11 Identities = 94/125 (75%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 115402 ATCGCACATCTGCTCTGAATCGGTTCGATGATTTTGGTGGAGTTGTTGCAGACTATGATG 115461 |||||||| | |||||||||||||| ||||| ||| |||| | |||||| | | | | Sbjct 886 ATCGCACAGCGACTCTGAATCGGTTCAATGATCTTGTTGGACTGGTTGCACGCGAAGCAG 945 Query 115462 AACCGCGTCGTGCTCGAGTAAACATCCATGATCCGTCGCAGCGCCTGGAAAGCACCAGGT 115521 || ||||||||| | | |||| ||||| | || || |||||||| ||||| ||| Sbjct 946 AAGCGCGTCGTGTTGGCATAAATCTCCATCGTACGGCGTAGCGCCTGCTGCGCACCGGGT 1005 Query 115522 GTCAT 115526 ||||| Sbjct 1006 GTCAT 1010 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073721522604416