Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001264875.1_202015-08-11] 3,262 sequences; 13,707,196 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq3174 123 2e-23 seq2836 111 1e-19 seq3230 89.7 4e-13 seq974 87.8 1e-12 seq877 84.2 2e-11 >seq3174 Length=2799 Score = 123 bits (136), Expect = 2e-23 Identities = 152/208 (73%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 ||||||||| ||||||||| |||||||||||| | || ||| | || || || || Sbjct 424 GTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTGAGCGTGCGGCCATCCTCGAGCTG 365 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 || ||||| || |||| ||||||||||| ||||| | |||||||||||| || || Sbjct 364 CTTACCGGCAAAGATCAGGCGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTT 305 Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312 ||| || | | | | ||||| ||| ||||| | |||||||||||| ||||| Sbjct 304 GGCCTTGACATTCTCGATGGTGTCCGACGACTCGACCTCGAGGGTAATCGTCTTACCCGT 245 Query 45313 CAGAGTCTTCACAAAGATTTGCATGTTG 45340 || ||||| || || | ||||||| || Sbjct 244 GAGGGTCTTGACGAACACTTGCATGGTG 217 >seq2836 Length=5357 Score = 111 bits (122), Expect = 1e-19 Identities = 147/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 ||| ||||| |||||||| |||||||||||| | || ||| | || || || || Sbjct 2894 GTGAAGCGTCGATTCCTTCTGGATGTTGTAGTCGCTAAGCGTGCGGCCATCCTCAAGCTG 2953 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 || ||||| || |||| ||||||||||| || || | ||||||||||||| ||| || Sbjct 2954 CTTGCCGGCAAAGATCAGGCGCTGTTGGTCCGGGGGAATACCCTCCTTGTCCTGAATCTT 3013 Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312 |||||| | | | ||||| | ||| ||||| | || || ||||||||||| Sbjct 3014 AGCCTTAACATTCTCGATCGTGTCCGAAGACTCGACCTCGAGCGTGATAGTCTTGCCCGT 3073 Query 45313 CAGAGTCTTCACAAAGATTTGCAT 45336 |||||||| || || | ||||| Sbjct 3074 AAGAGTCTTGACGAACACCTGCAT 3097 Score = 102 bits (112), Expect = 6e-17 Identities = 145/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 ||| ||||| ||||||||| |||||||||||| |||| ||| |||| |||||||| Sbjct 2666 GTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGAGTACGACCGTCTTCCAGTTG 2725 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 || |||||||| |||| ||||| ||||| || || | |||||||||||| || || Sbjct 2726 CTTACCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTT 2785 Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312 ||| || | | | |||| ||||| |||| || |||||||| || || Sbjct 2786 GGCCTTGACGTTCTCGATAGTGTCGGACGATTCCACTTCCAGCGTGATCGTCTTACCAGT 2845 Query 45313 CAGAGTCTTCACAAAGATTTGCAT 45336 || ||||| || || | ||||| Sbjct 2846 GAGTGTCTTGACGAACACCTGCAT 2869 Score = 98.7 bits (108), Expect = 8e-16 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 ||| ||||| ||||||||| |||||||||||| | || ||| | || || || || Sbjct 2438 GTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTAAGCGTGCGGCCATCCTCAAGCTG 2497 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 || || || || |||| ||||||||||| || || | |||||||||||| || || Sbjct 2498 CTTGCCAGCAAAGATCAGGCGCTGTTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTT 2557 Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312 ||| || | | | ||||| | ||| ||||| | || || ||||||||||| Sbjct 2558 CGCCTTGACGTTCTCGATCGTGTCCGAAGACTCGACCTCGAGCGTGATAGTCTTGCCCGT 2617 Query 45313 CAGAGTCTTCACAAAGATTTGCAT 45336 |||||||| || || | ||||| Sbjct 2618 AAGAGTCTTGACGAACACCTGCAT 2641 Score = 89.7 bits (98), Expect = 4e-13 Identities = 133/189 (70%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 ||| ||||| |||||||| |||||||||||| | || || | || || ||||| Sbjct 3350 GTGAAGCGTCGATTCCTTCTGGATGTTGTAGTCGCTAAGCGTACGGCCATCCTCAAGTTG 3409 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 || ||||| || |||| ||||| ||||| || || | ||||||||||||| || || Sbjct 3410 CTTGCCGGCAAAGATCAGGCGCTGCTGGTCCGGGGGAATACCCTCCTTGTCCTGGATCTT 3469 Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312 ||| || | | | ||||| ||| ||||| | || || ||||||||||| Sbjct 3470 AGCCTTCACGTTCTCGATCGTGTCCGAGGACTCGACCTCGAGCGTGATAGTCTTGCCCGT 3529 Query 45313 CAGAGTCTT 45321 |||||||| Sbjct 3530 AAGAGTCTT 3538 Score = 86.0 bits (94), Expect = 5e-12 Identities = 91/120 (76%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 ||| ||||| ||||||||| ||||||||||| |||| ||| | || || || || Sbjct 3122 GTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCACTCAGCGTGCGGCCATCCTCAAGCTG 3181 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 || || ||||| || | ||||||||||| ||||| | ||||||||||||| ||| || Sbjct 3182 CTTGCCAGCGAAGATAAGGCGCTGTTGGTCCGGAGGAATACCCTCCTTGTCCTGAATCTT 3241 >seq3230 Length=26649 Score = 89.7 bits (98), Expect = 4e-13 Identities = 87/112 (78%), Gaps = 0/112 (0%) Strand=Plus/Plus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 ||||||||| ||||||||| |||||||||||| | || || | || || || || Sbjct 2390 GTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTGAGCGTACGGCCATCCTCGAGCTG 2449 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244 || |||||||| |||| ||||||||||| ||||| | |||||||||||| Sbjct 2450 CTTGCCGGCGAAGATCAGGCGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCC 2501 >seq974 Length=24368 Score = 87.8 bits (96), Expect = 1e-12 Identities = 143/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 ||| ||||| ||||||||| ||||||||||| |||| ||| | || || || || Sbjct 105 GTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCACTCAGAGTACGACCATCCTCGAGCTG 164 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 || || || || || | ||||||||||| || || | |||||||||||| || || Sbjct 165 CTTGCCTGCAAAGATAAGGCGCTGTTGGTCCGGGGGAATACCCTCCTTGTCTTGGATCTT 224 Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312 | ||| || | | | |||| ||| || || | || |||||||| || || Sbjct 225 TGCCTTGACGTTCTCGATCGTGTCGGACGACTCGACTTCGAGTGTGATCGTCTTTCCTGT 284 Query 45313 CAGAGTCTTCACAAAGATTTGCATGT 45338 ||||||||| || || | ||||||| Sbjct 285 CAGAGTCTTTACGAAAACCTGCATGT 310 >seq877 Length=2157 Score = 84.2 bits (92), Expect = 2e-11 Identities = 85/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 45134 TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGT 45193 |||||||| ||||||||| |||||||||||| |||| ||| |||| || || || Sbjct 1851 TGCAGCGTAGACTCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGCCCGTCCTCGAGCTGC 1910 Query 45194 TTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244 || ||||| || || | ||||| || ||||| || | |||||||||||| Sbjct 1911 TTGCCGGCAAAGATGAGGCGCTGCTGATCGGGCGGAATGCCCTCCTTGTCC 1961 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395059493538502