Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001264875.1_202015-08-11] 3,262 sequences; 13,707,196 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq3012 98.7 1e-15 >seq3012 Length=3775 Score = 98.7 bits (108), Expect = 1e-15 Identities = 383/595 (64%), Gaps = 19/595 (3%) Strand=Plus/Minus Query 33572 AAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGA 33631 ||||| || || || || ||| ||||||||||||||| | || | ||||| || Sbjct 3293 AAACAGCAGGCACGCAAAGTCGGTGTGCAGACCCTCGTCACGCGAGATGAGCTCGTTCGA 3234 Query 33632 AAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCC 33691 |||| || |||||||| || || ||||| || ||||| || || || || || || || Sbjct 3233 GAACGACAGGCCGGGCATCAGACCGCGCTTCTTCAGCCAGAAGATCGAGGCAAACGAGCC 3174 Query 33692 GGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAAC------C 33745 || |||||||| || || || || ||||| || | ||| | ||| | | ||| | Sbjct 3173 CGAGAAGAAGATGCCCTCCACGGCGGCAAACGCCACAAGGCGCTC-CGAGAACGACGCAC 3115 Query 33746 GGCGCTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGT 33805 |||| ||| ||||| | ||||| |||||||||| || || || ||||| Sbjct 3114 GGCG--GTCGCTGATCCAGCGCAGCGCCCACTCGGCCTTCTGCTTCACCACCGGGATCGT 3057 Query 33806 TTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAA 33865 || || ||||| || | | ||| | | || | || || || || | Sbjct 3056 CTCAATCGCATTGAACAAAAAGTCGCGCTGCTCCGGCTCGCGGATGTACGTGTCAATGAG 2997 Query 33866 AAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCT 33925 || || | ||||| || ||||| ||||| ||||| || ||||| || || | Sbjct 2996 CAGCGAGTAGGTCTCCGAGTGGATGTTCTCAATCATGATCTGGAAACCGTAAAAGCAGCG 2937 Query 33926 AGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTCTGCTAAA--TTTTCATTCACTATT 33983 ||||||| |||||| || | | ||| ||||| | ||| || || || || || Sbjct 2936 CGCCTCGGCGGCCTGCACCTCGGAGCTAAAGCGTTC--CAAAAGGTTCTCGTTGACAATC 2879 Query 33984 CCATCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTT 34043 || || || ||||| ||||| | || || | ||||| | |||| || ||| Sbjct 2878 CCGTCCGATGCCGCAAAGAACGCAAGGACGTGGCTAATAAAGTGGCGCTCGT-TGTCGTT 2820 Query 34044 ----AGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAA 34099 | || | ||| || | | || || || | || | || || | ||||| || Sbjct 2819 CAGGCGGTTGTCCCAGTCGTGCAGGTCCTTGGACAGGTCAATCTCCTCGGCGGTCCAGAA 2760 Query 34100 TGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAA 34154 || ||||| ||||| || ||||| | ||| || || || || ||| ||||||| Sbjct 2759 CGACGCCTCGGCCTTCTTGTACATTTGCCAAATCTCGTGGTAGCGGA-TGGGAAA 2706 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629791919187360