Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001264875.1_202015-08-11] 3,262 sequences; 13,707,196 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq3174 113 4e-20 seq3230 96.9 3e-15 seq974 93.3 4e-14 seq3012 87.8 2e-12 >seq3174 Length=2799 Score = 113 bits (124), Expect = 4e-20 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||||||||| || || || | || || || |||||||| |||| |||||| | Sbjct 221 ATGCAAGTGTTCGTCAAGACCCTCACGGGTAAGACGATTACCCTCGAGGTCGAGTCGTCG 280 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||||||| | ||||| ||||| ||||| || ||||| ||||| || ||| Sbjct 281 GACACCATCGAGAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCAA 340 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| | ||||| | | ||| ||||| ||||| |||| | | | ||||||| || ||| Sbjct 341 CAGCGCCTGATCTTTGCCGGTAAGCAGCTCGAGGATGGCCGCACGCTCAGCGACTACAAC 400 Query 24171 ATTCAAAAAGAATCTAC 24187 || || || || || || Sbjct 401 ATCCAGAAGGAGTCGAC 417 >seq3230 Length=26649 Score = 96.9 bits (106), Expect = 3e-15 Identities = 118/161 (73%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 24027 ATTACCATCGAAGTCGAGGCCAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGAC 24086 |||||| |||| |||||| | |||||||||||| | || || ||||| ||| Sbjct 2557 ATTACCCTCGAGGTCGAGTCGTCGGACACCATCGAGAATGTGAAGGCCAAGATCCAGGAC 2498 Query 24087 AAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGAT 24146 || || ||||| ||||| || |||||| | ||||| | || ||||||||| ||||| ||| Sbjct 2497 AAGGAGGGCATTCCTCCGGACCAACAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGAT 2438 Query 24147 GACAGAAACGTCAGCGATTATAACATTCAAAAAGAATCTAC 24187 | | | | ||||||| || ||||| || || || || || Sbjct 2437 GGCCGTACGCTCAGCGACTACAACATCCAGAAGGAGTCGAC 2397 >seq974 Length=24368 Score = 93.3 bits (102), Expect = 4e-14 Identities = 149/213 (70%), Gaps = 1/213 (0%) Strand=Plus/Minus Query 23982 CCAAACAAA-ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGT 24040 ||||||| | ||||| || || ||||| || | || ||||| |||| || ||||||| Sbjct 318 CCAAACACACATGCAGGTTTTCGTAAAGACTCTGACAGGAAAGACGATCACACTCGAAGT 259 Query 24041 CGAGGCCAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACC 24100 |||| | |||||| |||||| | ||||| |||||| ||||| || || || || Sbjct 258 CGAGTCGTCCGACACGATCGAGAACGTCAAGGCAAAGATCCAAGACAAGGAGGGTATTCC 199 Query 24101 TCCCGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAG 24160 || || |||||| | || || | | |||||||| ||||| |||| | | | || Sbjct 198 CCCGGACCAACAGCGCCTTATCTTTGCAGGCAAGCAGCTCGAGGATGGTCGTACTCTGAG 139 Query 24161 CGATTATAACATTCAAAAAGAATCTACAATTCA 24193 || || ||||| || || || || || |||| Sbjct 138 TGACTACAACATCCAGAAGGAGTCGACGCTTCA 106 >seq3012 Length=3775 Score = 87.8 bits (96), Expect = 2e-12 Identities = 143/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 104611 TCaaaaaaaTTAGTCTTGCCCTCCAGAGAAATATTATTCATAAATTCGAAAGGATTCAAA 104670 || ||||| || | |||||||| ||| |||||||| | |||||| ||||| || ||| Sbjct 3550 TCGAAAAAGTTCGACTTGCCCTGCAGCGAAATATTCTCCATAAAGTCGAAGGGGTTCGTC 3491 Query 104671 GTCTTAAAATATTTTTCGTAGCCAAGCTCGATCAACAGTCGATCCGCCACAAATTCGATG 104730 | || | | || || ||| ||| | | | ||| || ||||||||||| || ||| Sbjct 3490 GCGTTGTAGTGCTTCGGGTTGCCCAGCGCCACGAGCAGGCGGTCCGCCACAAACTCAATG 3431 Query 104731 TACTCGCACATAGAATGTGCATTCATGCCCAGCATTGCGACGGGTAAAGCGTTAGTaaaa 104790 |||| |||||| | ||||||||||| | || | ||||| | |||| | || Sbjct 3430 TACTGGCACATCAGGCGCGCATTCATGCCAATCAGCGACACGGGCAGCGCGTCGGAAAGG 3371 Query 104791 aaaTCTTTCTCGATGTCCACGGCTTC 104816 || |||| ||| || |||| || || Sbjct 3370 AAGTCTTGCTCAATCGCCACCGCCTC 3345 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429918907625610