Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001264875.1_202015-08-11] 3,262 sequences; 13,707,196 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq3012 98.7 1e-15 >seq3012 Length=3775 Score = 98.7 bits (108), Expect = 1e-15 Identities = 387/603 (64%), Gaps = 18/603 (3%) Strand=Plus/Minus Query 32651 AAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGA 32710 ||||| || || || || ||| ||| ||||||||||| | || | ||||| || Sbjct 3293 AAACAGCAGGCACGCAAAGTCGGTGTGCAGACCCTCGTCACGCGAGATGAGCTCGTTCGA 3234 Query 32711 AAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCC 32770 |||| || |||||||| || || ||||| || ||||| || || || ||||| || || Sbjct 3233 GAACGACAGGCCGGGCATCAGACCGCGCTTCTTCAGCCAGAAGATCGAGGCAAACGAGCC 3174 Query 32771 AGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAAC------C 32824 || ||||| || || || || || ||||| || | ||| | ||| | | ||| | Sbjct 3173 CGAGAAGAAGATGCCCTCCACGGCGGCAAACGCCACAAGGCGCTC-CGAGAACGACGCAC 3115 Query 32825 GGCGCTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGT 32884 |||| ||| ||||| | ||||| |||||||||| || || || || || Sbjct 3114 GGCG--GTCGCTGATCCAGCGCAGCGCCCACTCGGCCTTCTGCTTCACCACCGGGATCGT 3057 Query 32885 CTCTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAA 32944 ||| || ||||| || | | ||| | | || | || || ||||| | Sbjct 3056 CTCAATCGCATTGAACAAAAAGTCGCGCTGCTCCGGCTCGCGGATGTACGTGTCAATGAG 2997 Query 32945 AAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCT 33004 || || | ||||| || ||||| ||||| || || || ||||| ||||| | Sbjct 2996 CAGCGAGTAGGTCTCCGAGTGGATGTTCTCAATCATGATCTGGAAACCGTAAAAGCAGCG 2937 Query 33005 AGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAA--TTTTCATTCACTATT 33062 ||||||| ||| || || | | ||| ||||| | ||| || || || || || Sbjct 2936 CGCCTCGGCGGCCTGCACCTCGGAGCTAAAGCGTTC--CAAAAGGTTCTCGTTGACAATC 2879 Query 33063 CCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTT 33122 ||||| || ||||| ||||| | || || | ||||| | |||| || ||| Sbjct 2878 CCGTCCGATGCCGCAAAGAACGCAAGGACGTGGCTAATAAAGTGGCGCTCGT-TGTCGTT 2820 Query 33123 ----AGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAA 33178 | || | ||| || | | || || || | || | || || | ||||| || Sbjct 2819 CAGGCGGTTGTCCCAGTCGTGCAGGTCCTTGGACAGGTCAATCTCCTCGGCGGTCCAGAA 2760 Query 33179 TGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAAC 33238 || ||||| ||||| || ||||| | ||| || || || || | || ||||| | || Sbjct 2759 CGACGCCTCGGCCTTCTTGTACATTTGCCAAATCTCGTGGTAGCGGATGGGAAACAGGAC 2700 Query 33239 AAA 33241 ||| Sbjct 2699 AAA 2697 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633606163655200