Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001264875.1_202015-08-11] 3,262 sequences; 13,707,196 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq974 132 4e-26 seq2836 109 5e-19 seq3174 104 2e-17 seq3230 89.7 4e-13 seq1001 84.2 2e-11 >seq974 Length=24368 Score = 132 bits (146), Expect = 4e-26 Identities = 151/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| | || ||||||||| |||| || || | |||||| ||||||| |||||||| Sbjct 308 ATGCAGGTTTTCGTAAAGACTCTGACAGGAAAGACGATCACACTCGAAGTCGAGTCGTCC 249 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| |||||| | ||| ||| ||| ||||| || || ||||| || |||||| Sbjct 248 GACACGATCGAGAACGTCAAGGCAAAGATCCAAGACAAGGAGGGTATTCCCCCGGACCAA 189 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| |||| ||||| ||||| || | || |||| ||| ||| || | || ||||| Sbjct 188 CAGCGCCTTATCTTTGCAGGCAAGCAGCTCGAGGATGGTCGTACTCTGAGTGACTACAAC 129 Query 25179 ATTCAAAAAGAATCCACGCTACA 25201 || || || || || ||||| || Sbjct 128 ATCCAGAAGGAGTCGACGCTTCA 106 >seq2836 Length=5357 Score = 109 bits (120), Expect = 5e-19 Identities = 146/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| | || || ||||| | || ||||| | ||||| | |||||||| ||||| Sbjct 2869 ATGCAGGTGTTCGTCAAGACACTCACTGGTAAGACGATCACGCTGGAAGTGGAATCGTCC 2810 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 |||||||||||| | ||| || ||| ||||| || || ||||| || ||||| Sbjct 2809 GACACTATCGAGAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAG 2750 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| | || || ||||| || ||| | ||||| | ||| ||| || |||| ||||| Sbjct 2749 CAGCGCCTGATCTTCGCCGGTAAGCAACTGGAAGACGGTCGTACTCTGAGCGACTACAAC 2690 Query 25179 ATTCAAAAAGAATCCACGCTACA 25201 || || || || || ||||| || Sbjct 2689 ATCCAGAAGGAGTCGACGCTTCA 2667 Score = 104 bits (114), Expect = 2e-17 Identities = 147/204 (72%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| | || || |||||| | || || || | ||||| |||| || ||||| || Sbjct 3097 ATGCAGGTGTTCGTCAAGACTCTTACGGGCAAGACTATCACGCTCGAGGTCGAGTCTTCG 3038 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||| |||||| | ||| | || | ||| ||||| || || ||||| || ||||| Sbjct 3037 GACACGATCGAGAATGTTAAGGCTAAGATTCAG-GACAAGGAGGGTATTCCCCCGGACCA 2979 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 |||||| | || ||||||||||| || | || |||| ||||| | |||| ||||| Sbjct 2978 ACAGCGCCTGATCTTTGCCGGCAAGCAGCTTGAGGATGGCCGCACGCTTAGCGACTACAA 2919 Query 25178 TATTCAAAAAGAATCCACGCTACA 25201 || || || ||||| ||||| || Sbjct 2918 CATCCAGAAGGAATCGACGCTTCA 2895 Score = 100 bits (110), Expect = 2e-16 Identities = 135/188 (72%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 25014 AAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATCGAGTCA 25073 |||||| | || || || | ||||| |||| || ||||| || ||||| |||||| Sbjct 3538 AAGACTCTTACGGGCAAGACTATCACGCTCGAGGTCGAGTCCTCGGACACGATCGAGAAC 3479 Query 25074 CTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGATTATTTTT 25133 ||||| || ||| ||||| || || ||||| || ||||| ||||| | || ||| Sbjct 3478 GTGAAGGCTAAGATCCAGGACAAGGAGGGTATTCCCCCGGACCAGCAGCGCCTGATCTTT 3419 Query 25134 GCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAAAGAATCC 25193 |||||||| ||| | || |||| || || | |||| ||||| || || || ||||| Sbjct 3418 GCCGGCAAGCAACTTGAGGATGGCCGTACGCTTAGCGACTACAACATCCAGAAGGAATCG 3359 Query 25194 ACGCTACA 25201 ||||| || Sbjct 3358 ACGCTTCA 3351 Score = 96.9 bits (106), Expect = 3e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| | || || |||||| | || || || | ||||| |||| || ||||| || Sbjct 2641 ATGCAGGTGTTCGTCAAGACTCTTACGGGCAAGACTATCACGCTCGAGGTCGAGTCTTCG 2582 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| |||||| | ||| || ||| ||||| || || ||||| || |||||| Sbjct 2581 GACACGATCGAGAACGTCAAGGCGAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAA 2522 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| | || ||||| ||||| || | || |||| ||||| | |||| ||||| Sbjct 2521 CAGCGCCTGATCTTTGCTGGCAAGCAGCTTGAGGATGGCCGCACGCTTAGCGACTACAAC 2462 Query 25179 ATTCAAAAAGAATCCACGCTACA 25201 || || || || || ||||| || Sbjct 2461 ATCCAGAAGGAGTCGACGCTTCA 2439 Score = 91.5 bits (100), Expect = 1e-13 Identities = 144/204 (71%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| | || || ||||| | || ||||| | ||||| | |||||||| ||||| Sbjct 3325 ATGCAGGTGTTCGTCAAGACGCTCACTGGTAAGACGATCACGCTGGAAGTGGAATCGTCC 3266 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 || || || || ||||| | || | ||| ||||| || || ||||| || ||||| Sbjct 3265 GATACGATTGAAAATGTGAAGGCCAAGATTCAG-GACAAGGAGGGTATTCCTCCGGACCA 3207 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 |||||| |||| || || ||||| || | || |||| ||||| || | || ||||| Sbjct 3206 ACAGCGCCTTATCTTCGCTGGCAAGCAGCTTGAGGATGGCCGCACGCTGAGTGACTACAA 3147 Query 25178 TATTCAAAAAGAATCCACGCTACA 25201 || || || || || ||||| || Sbjct 3146 CATCCAGAAGGAGTCGACGCTTCA 3123 >seq3174 Length=2799 Score = 104 bits (114), Expect = 2e-17 Identities = 152/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 24996 ACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCG 25055 || |||||| | || || ||||| | || ||||| | || || |||| || |||||| Sbjct 218 ACCATGCAAGTGTTCGTCAAGACCCTCACGGGTAAGACGATTACCCTCGAGGTCGAGTCG 277 Query 25056 TCTGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 || ||||| |||||| | ||| || ||| ||||| || || ||||| || ||| Sbjct 278 TCGGACACCATCGAGAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCTCCGGAC 337 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 |||||||| | || |||||||| || || | || |||| ||||| | |||| ||| Sbjct 338 CAACAGCGCCTGATCTTTGCCGGTAAGCAGCTCGAGGATGGCCGCACGCTCAGCGACTAC 397 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || || || || || || ||||| || | ||||| Sbjct 398 AACATCCAGAAGGAGTCGACGCTGCACCTTGTGCT 432 >seq3230 Length=26649 Score = 89.7 bits (98), Expect = 4e-13 Identities = 121/169 (72%), Gaps = 0/169 (0%) Strand=Plus/Minus Query 25042 TCGAAGTGGAGTCGTCTGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAG 25101 |||| || |||||||| ||||| |||||| ||||| || ||| ||||| || | Sbjct 2550 TCGAGGTCGAGTCGTCGGACACCATCGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGG 2491 Query 25102 GGATTCCACCTGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCA 25161 | ||||| || ||||||||||| | || || |||||||| || | || |||| || | Sbjct 2490 GCATTCCTCCGGACCAACAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGTA 2431 Query 25162 CTGTGGGCGATTACAATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 | | |||| ||||| || || || || || ||||| || | ||||| Sbjct 2430 CGCTCAGCGACTACAACATCCAGAAGGAGTCGACGCTGCACCTTGTGCT 2382 >seq1001 Length=1754 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/213 (69%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || | ||||| | || || || | ||||| |||| || |||||| Sbjct 499 ATGCAAATCTTCATCAAGACGCTCACGGGCAAGACGATCACGCTCGAGGTCGAGTCGAGC 440 Query 25059 GACACTATCGA-GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||| ||||| ||| | ||| || || ||||| || || || || || ||||| Sbjct 439 GACACGATCGACGTCG-TCAAGTCCAAGGTCCAGGACAAGGAGGGCATCCCCCCGGACCA 381 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 |||||| | || ||||| ||||| || | ||||| | ||||| | |||| ||||| Sbjct 380 ACAGCGCCTGATCTTTGCGGGCAAGCAGCTCGAAGACGGCCGCACGCTCAGCGACTACAA 321 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || || || || || ||||| || | ||||| Sbjct 320 CATCCAGAAGGAGTCGACGCTCCACCTTGTGCT 288 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433310772774530