Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001264875.1_202015-08-11] 3,262 sequences; 13,707,196 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq2836 107 2e-18 seq974 98.7 8e-16 seq877 98.7 8e-16 seq3174 95.1 1e-14 seq79 86.0 5e-12 >seq2836 Length=5357 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| | || || || || | || ||||| ||| |||| || ||||||||| | || Sbjct 3325 ATGCAGGTGTTCGTCAAGACGCTCACTGGTAAGACGATCACGCTGGAAGTGGAATCGTCC 3266 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | || || | || || ||||| ||||||||||||||||| || || ||| Sbjct 3265 GATACGATTGAAAATGTGAAGGCCAAGATTCAGGACAAGGAGGGTATTCCTCCGGACCAA 3206 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || ||||| || || ||||| ||| | |||||| |||||| | || |||||| Sbjct 3205 CAGCGCCTTATCTTCGCTGGCAAGCAGCTTGAGGATGGCCGCACGCTGAGTGACTACAAC 3146 Query 22399 ATTCAAAAAGAATCCAC 22415 || || || || || || Sbjct 3145 ATCCAGAAGGAGTCGAC 3129 Score = 98.7 bits (108), Expect = 8e-16 Identities = 108/144 (75%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || ||||| ||||||||||||||||| || || ||||| || || || ||||||||||| Sbjct 3013 AAGATTCAGGACAAGGAGGGTATTCCCCCGGACCAACAGCGCCTGATCTTTGCCGGCAAG 2954 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACAT 22422 ||| | |||||| |||||| | ||| |||||||| || || ||||| || | || Sbjct 2953 CAGCTTGAGGATGGCCGCACGCTTAGCGACTACAACATCCAGAAGGAATCGACGCTTCAC 2894 Query 22423 TTAGTTTTGCGATTGCGCGGAGGT 22446 | ||| | || | ||||| ||| Sbjct 2893 CTCGTTCTCCGCCTCCGCGGTGGT 2870 >seq974 Length=24368 Score = 98.7 bits (108), Expect = 8e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| |||| || || ||| | || || || ||| |||| || ||||| || | || Sbjct 308 ATGCAGGTTTTCGTAAAGACTCTGACAGGAAAGACGATCACACTCGAAGTCGAGTCGTCC 249 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || | |||| ||| || |||||||||||||||||||| || || ||| Sbjct 248 GACACGATCGAGAACGTCAAGGCAAAGATCCAAGACAAGGAGGGTATTCCCCCGGACCAA 189 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || ||||| ||||| ||||| ||| | |||||| || || | || |||||| Sbjct 188 CAGCGCCTTATCTTTGCAGGCAAGCAGCTCGAGGATGGTCGTACTCTGAGTGACTACAAC 129 Query 22399 ATTCAAAAAGAATCCAC 22415 || || || || || || Sbjct 128 ATCCAGAAGGAGTCGAC 112 >seq877 Length=2157 Score = 98.7 bits (108), Expect = 8e-16 Identities = 108/144 (75%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || || || ||||||||||| ||||| |||||||| || || || || ||||||||||| Sbjct 1969 AAGATCCAGGACAAGGAGGGCATTCCGCCCGATCAGCAGCGCCTCATCTTTGCCGGCAAG 1910 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACAT 22422 ||| | ||||| ||||| | ||| |||||||| || || || || || | ||| Sbjct 1909 CAGCTCGAGGACGGGCGCACGCTGAGCGACTACAACATCCAGAAGGAGTCTACGCTGCAT 1850 Query 22423 TTAGTTTTGCGATTGCGCGGAGGT 22446 | |||||||| ||||||| ||| Sbjct 1849 CTCGTTTTGCGCCTGCGCGGCGGT 1826 >seq3174 Length=2799 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||| | || || || || | || ||||| ||| | || || || || || | | Sbjct 221 ATGCAAGTGTTCGTCAAGACCCTCACGGGTAAGACGATTACCCTCGAGGTCGAGTCGTCG 280 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || || |||| || || || ||||||||||| ||||| || || ||| Sbjct 281 GACACCATCGAGAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCAA 340 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || |||||||| || ||| | |||||| |||||| || ||| |||||| Sbjct 341 CAGCGCCTGATCTTTGCCGGTAAGCAGCTCGAGGATGGCCGCACGCTCAGCGACTACAAC 400 Query 22399 ATTCAAAAAGAATCCAC 22415 || || || || || || Sbjct 401 ATCCAGAAGGAGTCGAC 417 >seq79 Length=269 Score = 86.0 bits (94), Expect = 5e-12 Identities = 98/132 (74%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 22315 AAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGAT 22374 |||||||| ||||| || || ||||| ||||| || ||||| ||||| ||| | |||||| Sbjct 269 AAGGAGGGCATTCCTCCGGACCAACAGCGTCTGATCTTTGCTGGCAAGCAGCTTGAGGAT 210 Query 22375 CACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGA 22434 |||||| || || ||||||||||| || || || || | ||||| ||| | || Sbjct 209 GGCCGCACGCTCAGTGACTACAACATTCAGAAGGAGTCGACGCTTCATTTGGTTCTCCGT 150 Query 22435 TTGCGCGGAGGT 22446 | || || ||| Sbjct 149 CTCCGTGGTGGT 138 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419711313451030