Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001264875.1_202015-08-11] 3,262 sequences; 13,707,196 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq3012 150 4e-31 seq1245 98.7 2e-15 seq2807 96.9 7e-15 >seq3012 Length=3775 Score = 150 bits (166), Expect = 4e-31 Identities = 548/836 (66%), Gaps = 35/836 (4%) Strand=Plus/Minus Query 251559 GCGTTCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTT 251618 ||| ||||| || || |||||||||| ||| || || |||||| |||||||||||||| Sbjct 3554 GCGCTCGAAAAAGTTCGACTTGCCCTGCAGCGAAATATTCTCCATAAAGTCGAAGGGGTT 3495 Query 251619 TGTGGCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTC 251678 || || ||||| ||||| || | ||| || || |||| | |||||| ||||||||||| Sbjct 3494 CGTCGCGTTGTAGTGCTTCGGGTTGCCCAGCGCCACGAGCAGGCGGTCCGCCACAAACTC 3435 Query 251679 CAGATACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACA-AGGAATTGCCTCAC 251737 | ||||| | |||||| | ||||||||||||| ||||| || | || || Sbjct 3434 AATGTACTGGCACATCAGGCGCGCATTCATGCCAATCA-GCGACACGGGCAGCGCGTCGG 3376 Query 251738 AGATGAATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCTTCACCTGTGCCAGAG 251797 | | ||| || | || | || || ||||| | || |||||| ||| | | | Sbjct 3375 AAAGGAAGTCTTGCTCAATCGCCACCGCCTCGGTAATGATGCGGTTCACC-GTGTCGGGG 3317 Query 251798 ACAGCTTG-TTCTCCAGCTTTGAGTACAGGA-GCTCGCCAAACTGTTGGTGCAGACCCTC 251855 || | |||| || | |||| | || || |||| | |||||||||||| Sbjct 3316 TGCGCGCGCTTCTTGAGGTGGCCAAACAGCAGGCACG-CAAAGTCGGTGTGCAGACCCTC 3258 Query 251856 GTCGCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAG 251915 ||| || ||||| |||||| || | |||||| ||||||| || || ||| | || Sbjct 3257 GTCACGCGAGATGAGCTCGTTCGAGAACGACAGGCCGGGCATCAGACCGCGCTTCTTCAG 3198 Query 251916 CCAGAAGATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGACACACACCCATGCAAC 251975 ||||||||| | | ||| || || ||||| | | ||||| || | | || || Sbjct 3197 CCAGAAGATCGAGGCAAACGAGCCCGAGAAGAAGATGCCCTCCACGGCGGCAAACGCCAC 3138 Query 251976 AAGGCGCTCAGCAAACGACTTGTCCTGCG-----ACAAGAACTTCTGTGCCCATGCTGCC 252030 ||||||||| | |||||| | | ||| | | | | ||||| | ||| Sbjct 3137 AAGGCGCTCCGAGAACGAC--GCACGGCGGTCGCTGATCCAGCGCAGCGCCCACTCGGCC 3080 Query 252031 TTCT--TTCCAACCGCGGGGATTGTTTCGATTGCATCAAAGAGAGAGTTCCGCTCGGCAT 252088 |||| ||| ||| | ||||| || || || |||| || | | ||| ||| | || Sbjct 3079 TTCTGCTTC--ACCACCGGGATCGTCTCAATCGCATTGAACAAAAAGT--CGCGCTGCTC 3024 Query 252089 CG--TCCTCGATGAGCGCATCAAGCAGGAGAGAGTACATCTCCGAATGGATGGATTCGTT 252146 || || |||| || |||| || || ||||| ||||||| |||||| || | Sbjct 3023 CGGCTCGCGGATGTACGTGTCAATGAGCAGCGAGTAGGTCTCCGAGTGGATGTTCTCAAT 2964 Query 252147 GAACATCTGGTAAGCATAGAATAGACGCGCGGAAGGGTCGG--TG-ACTTCCGTGGAAAA 252203 | |||||| || | | || || ||||| || ||| || || || | | ||| Sbjct 2963 CATGATCTGGAAACCGT--AAAAGCAGCGCGCCTCGG-CGGCCTGCACCTCGGAGCTAAA 2907 Query 252204 GTTGTTTGCAATGTTCTCCATCACCATGCCAT-CGCTGCCTGCAAAGAAGCCAAGAATGG 252262 | | || |||||| | || || || | || |||| |||||||| |||| | | Sbjct 2906 GCGTTCCAAAAGGTTCTCGTTGACAATCCCGTCCGATGCC-GCAAAGAACGCAAGGACGT 2848 Query 252263 TCTTGATGAAGTGACGCTCATCGTCGTT---GAGCTTGTCACGCCAGTCGGCAATGTCCT 252319 | || ||||| ||||| | |||||| | | ||||| ||||||| | ||||| Sbjct 2847 GGCTAATAAAGTGGCGCTCGTTGTCGTTCAGGCGGTTGTC---CCAGTCGTGCAGGTCCT 2791 Query 252320 GATTCAGAGGAACTTCTTCCACCGTCCAGAATGTGGACACCGCCTTCTTGTACATT 252375 ||| || || || | |||||||| | | | | ||||||||||||||| Sbjct 2790 TGGACAGGTCAATCTCCTCGGCGGTCCAGAACGACGCCTCGGCCTTCTTGTACATT 2735 >seq1245 Length=1421 Score = 98.7 bits (108), Expect = 2e-15 Identities = 129/179 (72%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 280179 GGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTGGCGAGACCCAGGCC 280238 || ||||| ||| |||||||||| || ||| |||| | | || || || || | Sbjct 751 GGCCCCAACGGTTCGGGTAAGTCGACGCTAGTCAAGCTGGTCGTCGGTGACACGGAGCCG 810 Query 280239 ACTGAGGGGTCCGTTTGGAAGCATCCCAACATGCGGATGGCTTACGTCGCTCAGCACGCT 280298 | ||||| | |||||||| |||||| || ||| | |||||||| |||||||| Sbjct 811 AACGAGGGTGAGCTGTGGAAGCACCCCAACCTGGTGATTGGCTACGTCGCCCAGCACGCC 870 Query 280299 TTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAATACATTCAGTGGCGCTA 280357 |||||||||||||| | |||||||||| ||| || | | ||||| | |||||||| Sbjct 871 TTCCACCACATCGACCAGCACCTGGACAAGACGCCGCTCGAGTACATGCTCTGGCGCTA 929 >seq2807 Length=5862 Score = 96.9 bits (106), Expect = 7e-15 Identities = 134/188 (71%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 280170 GGTGTCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTGGCGAG 280229 ||||||||||| || || ||||| || ||||| || || ||||| || || || |||||| Sbjct 2424 GGTGTCATTGGCCCGAACGGTGCCGGCAAGTCGACGCTGATCAAGGTGCTCACCGGCGAG 2365 Query 280230 ACCCAGGCCACTGAGGGGTCCGTTTGGAAGCATCCCAACATGCGGATGGCTTACGTCGCT 280289 | | | || ||||| || |||||| |||||| |||| | || | | || Sbjct 2364 ATCGTCCCGACCGAGGGCAAGGTCGAGAAGCACCCCAACCTGCGTGTCGCGCTCATGGCA 2305 Query 280290 CAGCACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAATACATTCAG 280349 |||||||| ||||||||| ||||| | ||||| || | ||| | ||| ||||| Sbjct 2304 CAGCACGCGTTCCACCACCTCGAGCAGCACCTCGAGAAGACCGCGTGCCAGTACATCACC 2245 Query 280350 TGGCGCTA 280357 |||||||| Sbjct 2244 TGGCGCTA 2237 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027793842203342