Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001264875.1_202015-08-11] 3,262 sequences; 13,707,196 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq877 91.5 1e-13 seq2836 87.8 1e-12 seq881 82.4 6e-11 >seq877 Length=2157 Score = 91.5 bits (100), Expect = 1e-13 Identities = 104/137 (76%), Gaps = 2/137 (1%) Strand=Plus/Plus Query 33900 ACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGC 33959 ||| || | ||| |||| || ||||| ||||| ||||||||| |||||||| || || Sbjct 1826 ACCGCCGCGCAGGCGCAAAACGAGATGCAGCGTAGACTCCTTCTGGATGTTGTAGTC-GC 1884 Query 33960 CAATTGT-CGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCG 34018 | || ||| |||| || | |||||||||||||| || |||||||||||||| || Sbjct 1885 TCAGCGTGCGCCCGTCCTCGAGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGATCGGGCG 1944 Query 34019 GCACGCTCTCTTTGTCC 34035 | | || ||| |||||| Sbjct 1945 GAATGCCCTCCTTGTCC 1961 >seq2836 Length=5357 Score = 87.8 bits (96), Expect = 1e-12 Identities = 103/137 (75%), Gaps = 2/137 (1%) Strand=Plus/Plus Query 33900 ACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGC 33959 ||| || | ||| || || || || |||||||| ||||||||| |||||||| || || Sbjct 2642 ACCACCACGCAGACGAAGGACGAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTC-GC 2700 Query 33960 CAATTGT-CGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCG 34018 | || || |||| |||| |||||| ||||| || |||||||||||||| ||| | Sbjct 2701 TCAGAGTACGACCGTCTTCCAGTTGCTTACCGGCGAAGATCAGGCGCTGCTGGTCCGGGG 2760 Query 34019 GCACGCTCTCTTTGTCC 34035 | | || ||| |||||| Sbjct 2761 GAATGCCCTCCTTGTCC 2777 >seq881 Length=2154 Score = 82.4 bits (90), Expect = 6e-11 Identities = 102/137 (74%), Gaps = 2/137 (1%) Strand=Plus/Plus Query 33900 ACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGC 33959 ||| || | ||| ||||| || || || ||||| ||||||||| |||||||| || || Sbjct 1819 ACCGCCGCGCAGGCGCAGGACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTC-GC 1877 Query 33960 CAATTGT-CGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCG 34018 | || ||| |||| || | |||||||||||||| || || |||||||| ||| || Sbjct 1878 TCAGCGTGCGCCCGTCCTCGAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGGTCCGGCG 1937 Query 34019 GCACGCTCTCTTTGTCC 34035 | | || ||| || ||| Sbjct 1938 GGATGCCCTCCTTATCC 1954 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397046614536124